Releases: hubmapconsortium/ccf-validation-tools
Releases · hubmapconsortium/ccf-validation-tools
2024-03-20
Release Notes
Ontology release
| Ontology |
Version |
| PCL |
2024-01-04 |
| UBERON |
2024-02-20 |
| CL |
2024-02-13 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.1 |
revise for April 1, 2024 |
| Blood |
v1.4 |
revise for April 1, 2024 |
| Bone-Marrow |
v1.5 |
revise for April 1, 2024 |
| Brain |
v1.6 |
Revise for April 1, 2024 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.3 |
Revise for April 1, 2024 |
| Heart |
v1.4 |
revise for April 2024 |
| Kidney |
v1.5 |
revise for 4/1/2024 |
| Knee |
v1.3 |
revise for April 1, 2024 |
| Large_intestine |
v1.4 |
revise for April 1, 2024 |
| Liver |
v1.3 |
Revise for April 1, 2024 |
| Lung |
v1.5 |
NA |
| Lymph_node |
v1.4 |
revise for April 1, 2024 |
| Lymph_vasculature |
v1.5 |
revise for April 1, 2024 |
| Main_Bronchus |
v1.2 |
revise for April 1, 2024 |
| Mammary_Gland |
v1.0 |
revise for April 1, 2024 |
| Muscular_System |
v1.2 |
revise for April 1, 2024 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.4 |
revise for April 1, 2024 |
| Palatine_Tonsil |
V1.1 |
revise for April 1, 2024 |
| Peripheral_nervous_system |
v1.2 |
revise for April 1, 2024 |
| Placenta |
1.2 |
3/5/24 |
| Prostate |
v1.2 |
NA |
| Skeleton |
v1.1 |
revise for April 1, 2024 |
| Skin |
v1.4 |
Revise for April 1, 2024 |
| Small_intestine |
v1.2 |
revise for April 1, 2024 |
| Spinal_Cord |
v1.0 |
revise for April 1, 2024 |
| Spleen |
v1.4 |
revise for April 1, 2024 |
| Thymus |
v1.5 |
revise for April 1, 2024 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for April 1, 2024 |
| Blood_vasculature |
v1.6 |
revise for April 1, 2024 |
2024-03-13
Release Notes
Ontology release
| Ontology |
Version |
| PCL |
2024-01-04 |
| UBERON |
2024-02-20 |
| CL |
2024-02-13 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.1 |
revise for April 1, 2024 |
| Blood |
v1.4 |
revise for April 1, 2024 |
| Bone-Marrow |
v1.5 |
revise for April 1, 2024 |
| Brain |
v1.6 |
Revise for April 1, 2024 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.3 |
Revise for April 1, 2024 |
| Heart |
v1.4 |
revise for April 2024 |
| Kidney |
v1.5 |
revise for 4/1/2024 |
| Knee |
v1.3 |
revise for April 1, 2024 |
| Large_intestine |
v1.4 |
revise for April 1, 2024 |
| Liver |
v1.3 |
Revise for April 1, 2024 |
| Lung |
v1.5 |
NA |
| Lymph_node |
v1.4 |
revise for April 1, 2024 |
| Lymph_vasculature |
v1.5 |
revise for April 1, 2024 |
| Main_Bronchus |
v1.2 |
revise for April 1, 2024 |
| Mammary_Gland |
v1.0 |
revise for April 1, 2024 |
| Muscular_System |
v1.2 |
revise for April 1, 2024 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.4 |
revise for April 1, 2024 |
| Palatine_Tonsil |
V1.1 |
revise for April 1, 2024 |
| Peripheral_nervous_system |
v1.2 |
revise for April 1, 2024 |
| Placenta |
1.2 |
3/5/24 |
| Prostate |
v1.2 |
NA |
| Skeleton |
v1.1 |
revise for April 1, 2024 |
| Skin |
v1.4 |
Revise for April 1, 2024 |
| Small_intestine |
v1.2 |
revise for April 1, 2024 |
| Spinal_Cord |
v1.0 |
revise for April 1, 2024 |
| Spleen |
v1.4 |
revise for April 1, 2024 |
| Thymus |
v1.5 |
revise for April 1, 2024 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for April 1, 2024 |
| Blood_vasculature |
v1.6 |
revise for April 1, 2024 |
2024-03-06
Release Notes
Ontology release
| Ontology |
Version |
| CL |
2024-02-13 |
| UBERON |
2024-02-20 |
| PCL |
2024-01-04 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.1 |
revise for April 1, 2024 |
| Blood |
v1.4 |
revise for April 1, 2024 |
| Bone-Marrow |
v1.5 |
revise for April 1, 2024 |
| Brain |
v1.6 |
Revise for April 1, 2024 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.3 |
Revise for April 1, 2024 |
| Heart |
v1.4 |
revise for April 2024 |
| Kidney |
v1.5 |
revise for 4/1/2024 |
| Knee |
v1.3 |
revise for April 1, 2024 |
| Large_intestine |
v1.4 |
revise for April 1, 2024 |
| Liver |
v1.3 |
Revise for April 1, 2024 |
| Lung |
v1.5 |
NA |
| Lymph_node |
v1.4 |
revise for April 1, 2024 |
| Lymph_vasculature |
v1.5 |
revise for April 1, 2024 |
| Main_Bronchus |
v1.2 |
revise for April 1, 2024 |
| Mammary_Gland |
v1.0 |
revise for April 1, 2024 |
| Muscular_System |
v1.2 |
revise for April 1, 2024 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.4 |
revise for April 1, 2024 |
| Palatine_Tonsil |
V1.1 |
revise for April 1, 2024 |
| Peripheral_nervous_system |
v1.2 |
revise for April 1, 2024 |
| Placenta |
1.2 |
3/5/24 |
| Prostate |
v1.2 |
NA |
| Skeleton |
v1.1 |
revise for April 1, 2024 |
| Skin |
v1.4 |
Revise for April 1, 2024 |
| Small_intestine |
v1.2 |
revise for April 1, 2024 |
| Spinal_Cord |
v1.0 |
revise for April 1, 2024 |
| Spleen |
v1.4 |
revise for April 1, 2024 |
| Thymus |
v1.5 |
revise for April 1, 2024 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for April 1, 2024 |
| Blood_vasculature |
v1.6 |
revise for April 1, 2024 |
2024-02-28
Release Notes
Ontology release
| Ontology |
Version |
| CL |
2024-01-04 |
| PCL |
2024-01-04 |
| UBERON |
2024-01-18 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.4 |
revise for October 1, 2023 |
| Bone-Marrow |
v1.5 |
revise for April 1, 2024 |
| Brain |
v1.6 |
Revise for April 1, 2024 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.3 |
Revise for April 1, 2024 |
| Heart |
v1.3 |
revise for April 2024 |
| Kidney |
v1.4 |
revise for 4/1/2024 |
| Knee |
v1.3 |
revise for April 1, 2024 |
| Large_intestine |
v1.4 |
revise for October, 2023 |
| Liver |
v1.3 |
NA |
| Lung |
v1.5 |
NA |
| Lymph_node |
v1.4 |
revise for April 1, 2024 |
| Lymph_vasculature |
v1.5 |
revise for April 1, 2024 |
| Main_Bronchus |
v1.0 |
revise for October 1, 2023 |
| Mammary_Gland |
v1.0 |
revise for October 1, 2023 |
| Muscular_System |
v1.2 |
revise for April 1, 2024 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.4 |
revise for April 1, 2024 |
| Palatine_Tonsil |
V1.1 |
revise for April 1, 2024 |
| Peripheral_nervous_system |
v1.2 |
revise for April 1, 2024 |
| Placenta |
v1.2 |
revise for April 1, 2024 |
| Prostate |
v1.1 |
December 15, 2023 |
| Skeleton |
v1.1 |
revise for April 1, 2024 |
| Skin |
v1.4 |
Revise for April 1, 2024 |
| Small_intestine |
v1.2 |
revise for April 1, 2023 |
| Spinal_Cord |
v1.0 |
revise for October 1, 2023 |
| Spleen |
v1.4 |
revise for October 1, 2023 |
| Thymus |
v1.5 |
revise for April 1, 2024 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for October 1, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
2024-02-05
Release Notes
Ontology release
| Ontology |
Version |
| CL |
2024-01-04 |
| UBERON |
2024-01-18 |
| PCL |
2024-01-04 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.3 |
December 15, 2022 |
| Bone-Marrow |
v1.4 |
December 15, 2023 |
| Brain |
v1.5 |
December 15, 2023 |
| Eye |
v1.2 |
June 15, 2023 |
| Fallopian_tube |
v1.2 |
December 15, 2023 |
| Heart |
v1.3 |
December 15, 2023 |
| Kidney |
v1.4 |
December 15, 2023 |
| Knee |
v1.1 |
December 15, 2023 |
| Large_intestine |
v1.3 |
December 15, 2022 |
| Liver |
v1.2 |
December 15, 2023 |
| Lung |
v1.4 |
December 15, 2023 |
| Lymph_node |
v1.3 |
December 15, 2023 |
| Lymph_vasculature |
v1.4 |
December 15, 2023 |
| Main_Bronchus |
v1.1 |
December 15, 2023 |
| Muscular_System |
v1.1 |
December 15, 2023 |
| Ovary |
v1.2 |
12/15/2022 |
| Pancreas |
v1.3 |
December 15, 2023 |
| Palatine_Tonsil |
V1.0 |
December 15, 2023 |
| Peripheral_nervous_system |
v1.1 |
December 15, 2023 |
| Placenta |
v1.1 |
December 15, 2023 |
| Prostate |
v1.1 |
December 15, 2023 |
| Skeleton |
v1.1 |
December 15, 2023 |
| Skin |
v1.3 |
December 15, 2023 |
| Small_intestine |
v1.1 |
December 15, 2022 |
| Spinal_Cord |
v1.0 |
June 15, 2023 |
| Spleen |
v1.3 |
December 15, 2022 |
| Thymus |
v1.4 |
December 15, 2023 |
| Trachea |
v1.0 |
June 15, 2023 |
| Ureter |
v1.0 |
12/1/2021 |
| Urinary_bladder |
v1.0 |
12/1/2021 |
| Uterus |
v1.1 |
May 6, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
Release CCF v2.3.0 2023-12-07
Release Notes
Ontology release
| Ontology |
Version |
| PCL |
2023-02-27 |
| CL |
2023-10-19 |
| UBERON |
2023-10-27 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.3 |
December 15, 2022 |
| Bone-Marrow |
v1.4 |
December 15, 2023 |
| Brain |
v1.5 |
December 15, 2023 |
| Eye |
v1.2 |
June 15, 2023 |
| Fallopian_tube |
v1.2 |
December 15, 2023 |
| Heart |
v1.3 |
December 15, 2023 |
| Kidney |
v1.4 |
December 15, 2023 |
| Knee |
v1.1 |
December 15, 2023 |
| Large_intestine |
v1.3 |
December 15, 2022 |
| Liver |
v1.2 |
December 15, 2023 |
| Lung |
v1.4 |
December 15, 2023 |
| Lymph_node |
v1.3 |
December 15, 2023 |
| Lymph_vasculature |
v1.4 |
December 15, 2023 |
| Main_Bronchus |
v1.1 |
December 15, 2023 |
| Muscular_System |
v1.1 |
December 15, 2023 |
| Ovary |
v1.2 |
12/15/2022 |
| Pancreas |
v1.3 |
December 15, 2023 |
| Palatine_Tonsil |
V1.0 |
December 15, 2023 |
| Peripheral_nervous_system |
v1.1 |
December 15, 2023 |
| Placenta |
v1.1 |
December 15, 2023 |
| Prostate |
v1.1 |
December 15, 2023 |
| Skeleton |
v1.1 |
December 15, 2023 |
| Skin |
v1.3 |
December 15, 2023 |
| Small_intestine |
v1.1 |
December 15, 2022 |
| Spinal_Cord |
v1.0 |
June 15, 2023 |
| Spleen |
v1.3 |
December 15, 2022 |
| Thymus |
v1.4 |
December 15, 2023 |
| Trachea |
v1.0 |
June 15, 2023 |
| Ureter |
v1.0 |
12/1/2021 |
| Urinary_bladder |
v1.0 |
12/1/2021 |
| Uterus |
v1.1 |
May 6, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
2023-12-06
Release Notes
Ontology release
| Ontology |
Version |
| UBERON |
2023-10-27 |
| PCL |
2023-02-27 |
| CL |
2023-10-19 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.4 |
revise for October 1, 2023 |
| Bone-Marrow |
v1.4 |
December 15, 2023 |
| Brain |
v1.5 |
December 15, 2023 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.2 |
December 15, 2023 |
| Heart |
v1.3 |
December 15, 2023 |
| Kidney |
v1.4 |
December 15, 2023 |
| Knee |
v1.1 |
December 15, 2023 |
| Large_intestine |
v1.4 |
revise for October, 2023 |
| Liver |
v1.2 |
December 15, 2023 |
| Lung |
v1.4 |
December 15, 2023 |
| Lymph_node |
v1.3 |
December 15, 2023 |
| Lymph_vasculature |
v1.4 |
December 15, 2023 |
| Main_Bronchus |
v1.1 |
December 15, 2023 |
| Mammary_Gland |
v1.0 |
revise for October 1, 2023 |
| Muscular_System |
v1.1 |
December 15, 2023 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.3 |
December 15, 2023 |
| Palatine_Tonsil |
V1.0 |
December 15, 2023 |
| Peripheral_nervous_system |
v1.1 |
December 15, 2023 |
| Placenta |
v1.1 |
December 15, 2023 |
| Prostate |
v1.1 |
December 15, 2023 |
| Skeleton |
v1.1 |
December 15, 2023 |
| Skin |
v1.3 |
December 15, 2023 |
| Small_intestine |
v1.2 |
revise for April 1, 2023 |
| Spinal_Cord |
v1.0 |
revise for October 1, 2023 |
| Spleen |
v1.4 |
revise for October 1, 2023 |
| Thymus |
v1.4 |
December 15, 2023 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for October 1, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
2023-11-29
Release Notes
Ontology release
| Ontology |
Version |
| CL |
2023-10-19 |
| UBERON |
2023-10-27 |
| PCL |
2023-02-27 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.4 |
revise for October 1, 2023 |
| Bone-Marrow |
v1.3 |
revise for October 1, 2023 |
| Brain |
v1.5 |
December 15, 2023 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.2 |
December 15, 2023 |
| Heart |
v1.3 |
December 15, 2023 |
| Kidney |
v1.4 |
December 15, 2023 |
| Knee |
v1.1 |
December 15, 2023 |
| Large_intestine |
v1.4 |
revise for October, 2023 |
| Liver |
v1.2 |
December 15, 2023 |
| Lung |
v1.4 |
December 15, 2023 |
| Lymph_node |
v1.3 |
revise for October 1, 2023 |
| Lymph_vasculature |
v1.4 |
December 15, 2023 |
| Main_Bronchus |
v1.1 |
December 15, 2023 |
| Mammary_Gland |
v1.0 |
revise for October 1, 2023 |
| Muscular_System |
v1.1 |
December 15, 2023 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.3 |
December 15, 2023 |
| Palatine_Tonsil |
V1.0 |
December 15, 2023 |
| Peripheral_nervous_system |
v1.1 |
December 15, 2023 |
| Placenta |
v1.1 |
December 15, 2023 |
| Prostate |
v1.1 |
revise for Oct 1, 2023 |
| Skeleton |
v1.1 |
December 15, 2023 |
| Skin |
v1.3 |
December 15, 2023 |
| Small_intestine |
v1.2 |
revise for April 1, 2023 |
| Spinal_Cord |
v1.0 |
revise for October 1, 2023 |
| Spleen |
v1.4 |
revise for October 1, 2023 |
| Thymus |
v1.4 |
December 15, 2023 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for October 1, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
2023-11-22
Release Notes
Ontology release
| Ontology |
Version |
| CL |
2023-10-19 |
| UBERON |
2023-10-27 |
| PCL |
2023-02-27 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.4 |
revise for October 1, 2023 |
| Bone-Marrow |
v1.3 |
revise for October 1, 2023 |
| Brain |
v1.5 |
December 15, 2023 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.2 |
December 15, 2023 |
| Heart |
v1.3 |
revise for October 1, 2023 |
| Kidney |
v1.4 |
December 15, 2023 |
| Knee |
v1.1 |
December 15, 2023 |
| Large_intestine |
v1.4 |
revise for October, 2023 |
| Liver |
v1.2 |
December 15, 2023 |
| Lung |
v1.4 |
December 15, 2023 |
| Lymph_node |
v1.3 |
revise for October 1, 2023 |
| Lymph_vasculature |
v1.4 |
September 27, 2023 |
| Main_Bronchus |
v1.1 |
December 15, 2023 |
| Mammary_Gland |
v1.0 |
revise for October 1, 2023 |
| Muscular_System |
v1.1 |
September 27, 2023 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.3 |
revise for October 1, 2023 |
| Palatine_Tonsil |
V1.0 |
revise for October 1, 2023 |
| Peripheral_nervous_system |
v1.1 |
revise for Oct 1, 2023 |
| Placenta |
v1.1 |
December 1, 2023 |
| Prostate |
v1.1 |
revise for Oct 1, 2023 |
| Skeleton |
v1.1 |
December 15, 2023 |
| Skin |
v1.3 |
December 15, 2023 |
| Small_intestine |
v1.2 |
revise for April 1, 2023 |
| Spinal_Cord |
v1.0 |
revise for October 1, 2023 |
| Spleen |
v1.4 |
revise for October 1, 2023 |
| Thymus |
v1.4 |
December 15, 2023 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for October 1, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
2023-11-15
Release Notes
Ontology release
| Ontology |
Version |
| PCL |
2023-02-27 |
| CL |
2023-10-19 |
| UBERON |
2023-10-27 |
ASCT+b Tables
| Organ |
Version |
Date |
| Anatomical_Systems |
v1.0 |
December 15, 2023 |
| Blood |
v1.4 |
revise for October 1, 2023 |
| Bone-Marrow |
v1.3 |
revise for October 1, 2023 |
| Brain |
v1.5 |
December 15, 2023 |
| Eye |
v1.4 |
revise for October 1, 2023 |
| Fallopian_tube |
v1.2 |
December 15, 2023 |
| Heart |
v1.3 |
revise for October 1, 2023 |
| Kidney |
v1.4 |
December 15, 2023 |
| Knee |
v1.1 |
December 15, 2023 |
| Large_intestine |
v1.4 |
revise for October, 2023 |
| Liver |
v1.2 |
revise for October 1, 2023 |
| Lung |
v1.4 |
December 15, 2023 |
| Lymph_node |
v1.3 |
revise for October 1, 2023 |
| Lymph_vasculature |
v1.4 |
September 27, 2023 |
| Main_Bronchus |
v1.1 |
December 15, 2023 |
| Mammary_Gland |
v1.0 |
revise for October 1, 2023 |
| Muscular_System |
v1.1 |
September 27, 2023 |
| Ovary |
v1.3 |
revise for April 1, 2023 |
| Pancreas |
v1.3 |
revise for October 1, 2023 |
| Palatine_Tonsil |
V1.0 |
revise for October 1, 2023 |
| Peripheral_nervous_system |
v1.1 |
revise for Oct 1, 2023 |
| Placenta |
v1.1 |
10/1/23 |
| Prostate |
v1.1 |
revise for Oct 1, 2023 |
| Skeleton |
v1.1 |
September 27, 2023 |
| Skin |
v1.3 |
revise for October 1, 2023 |
| Small_intestine |
v1.2 |
revise for April 1, 2023 |
| Spinal_Cord |
v1.0 |
revise for October 1, 2023 |
| Spleen |
v1.4 |
revise for October 1, 2023 |
| Thymus |
v1.4 |
revise for October 1, 2023 |
| Trachea |
v1.1 |
revise for October 1 |
| Ureter |
NA |
revise for April 2023 |
| Urinary_bladder |
v1.1 |
revise for April 2024 |
| Uterus |
v1.2 |
revise for October 1, 2022 |
| Blood_vasculature |
v1.5 |
December 15, 2023 |
