From 8a4e5ce0a6a0052afd81549822c476cad1ff2bb6 Mon Sep 17 00:00:00 2001 From: hujambo-dunia Date: Wed, 9 Oct 2024 03:07:41 +0000 Subject: [PATCH] Import GTN Posts --- .../index.md | 19 +++++++++++++++ .../index.md | 23 ++++++++++++++++++ .../index.md | 22 +++++++++++++++++ .../2024-06-14-gtn-video-library/index.md | 17 +++++++++++++ .../index.md | 24 +++++++++++++++++++ content/news/2024-07-09-gcc-updates/index.md | 18 ++++++++++++++ .../2024-07-11-CC2024-registration/index.md | 18 ++++++++++++++ .../index.md | 21 ++++++++++++++++ content/news/2024-07-17-google-forms/index.md | 21 ++++++++++++++++ .../index.md | 21 ++++++++++++++++ 10 files changed, 204 insertions(+) create mode 100644 content/news/2024-06-11-GalaxyTrainingAcademy-Call-Contribution/index.md create mode 100644 content/news/2024-06-13-from-gtn-intern-to-tutorial-author-to-bioinformatician/index.md create mode 100644 content/news/2024-06-13-phylogenetics-tutorial-takes-researchers-back-to-basics/index.md create mode 100644 content/news/2024-06-14-gtn-video-library/index.md create mode 100644 content/news/2024-07-08-4th-mycobamycobacterium-tuberculosis-complex-ngs-made-easy/index.md create mode 100644 content/news/2024-07-09-gcc-updates/index.md create mode 100644 content/news/2024-07-11-CC2024-registration/index.md create mode 100644 content/news/2024-07-12-tutorial-snapatac-standard/index.md create mode 100644 content/news/2024-07-17-google-forms/index.md create mode 100644 content/news/2024-07-22-Galaxy-Administrator-Time-Burden-and-Technology-Usage/index.md diff --git a/content/news/2024-06-11-GalaxyTrainingAcademy-Call-Contribution/index.md b/content/news/2024-06-11-GalaxyTrainingAcademy-Call-Contribution/index.md new file mode 100644 index 0000000000..392d69cfac --- /dev/null +++ b/content/news/2024-06-11-GalaxyTrainingAcademy-Call-Contribution/index.md @@ -0,0 +1,19 @@ +--- +authors: "Teresa M\xFCller" +date: '2024-06-11' +external_url: https://training.galaxyproject.org/training-material/news/2024/06/11/GalaxyTrainingAcademy-Call-Contribution.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- gtn +tease: We are happy to announce the Galaxy Training Academy 2024, a global online + training event, where learners can get to know Galaxy and learn how to analyze data + for various research topics. +title: Open Call for Trainers for the Galaxy Training Academy + +--- +We are happy to announce the Galaxy Training Academy 2024, a global online training event, where learners can get to know Galaxy and learn how to analyze data for various research topics. \ No newline at end of file diff --git a/content/news/2024-06-13-from-gtn-intern-to-tutorial-author-to-bioinformatician/index.md b/content/news/2024-06-13-from-gtn-intern-to-tutorial-author-to-bioinformatician/index.md new file mode 100644 index 0000000000..e6f93d6bc1 --- /dev/null +++ b/content/news/2024-06-13-from-gtn-intern-to-tutorial-author-to-bioinformatician/index.md @@ -0,0 +1,23 @@ +--- +authors: Camila Goclowski +date: '2024-06-13' +external_url: https://training.galaxyproject.org/training-material/news/2024/06/13/from-gtn-intern-to-tutorial-author-to-bioinformatician.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- single-cell +- training +- education +- trajectory +- user +- contributor +tease: With growing access and interest in sequencing data, Galaxy is a knight in + shining armor for wet lab scientists hoping to analyze their own data +title: From GTN Intern to Tutorial Author to Bioinformatician + +--- +With growing access and interest in sequencing data, Galaxy is a knight in shining armor for wet lab scientists hoping to analyze their own data. With long term intentions of increasing access to bioinformatic analyses, the Galaxy Training Network (GTN) creates a safe space where non-computer-scientists may analyze their own data and even learn to code: an invaluable skill in today’s scientific world. Galaxy introduced me to brand new skills as an undergraduate and ultimately changed the trajectory of my career. Here is my story as a biology undergraduate with no coding experience turned GTN contributor &, eventually, coding bioinformatician: thanks to Galaxy. \ No newline at end of file diff --git a/content/news/2024-06-13-phylogenetics-tutorial-takes-researchers-back-to-basics/index.md b/content/news/2024-06-13-phylogenetics-tutorial-takes-researchers-back-to-basics/index.md new file mode 100644 index 0000000000..3748e4eff3 --- /dev/null +++ b/content/news/2024-06-13-phylogenetics-tutorial-takes-researchers-back-to-basics/index.md @@ -0,0 +1,22 @@ +--- +authors: Melissa Burke +date: '2024-06-13' +external_url: https://training.galaxyproject.org/training-material/news/2024/06/13/phylogenetics-tutorial-takes-researchers-back-to-basics.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- Phylogenetics +- Tutorial +- GTN +- Australian BioCommons +tease: A new Galaxy Training Network tutorial has been created to take researchers + back to basics to uncover the principles of phylogenetics and how tree-building + methods work +title: Phylogenetics tutorial takes researchers back to basics! + +--- +A new Galaxy Training Network tutorial has been created to take researchers back to basics to uncover the principles of phylogenetics and how tree-building methods work. A longstanding collaboration between Professor Michael Charleston from the University of Tasmania and Australian BioCommons has delivered this self-guided tutorial featuring videos and hands-on exercises. To maximise its impact, the resource was tailored specifically to be shared globally via the Galaxy Training Network, and will form the basis of an upcoming live training workshop. \ No newline at end of file diff --git a/content/news/2024-06-14-gtn-video-library/index.md b/content/news/2024-06-14-gtn-video-library/index.md new file mode 100644 index 0000000000..72c2b2ab28 --- /dev/null +++ b/content/news/2024-06-14-gtn-video-library/index.md @@ -0,0 +1,17 @@ +--- +authors: Saskia Hiltemann, Helena Rasche +date: '2024-06-14' +external_url: https://training.galaxyproject.org/training-material/news/2024/06/14/gtn-video-library.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- gtn +tease: Many GTN tutorials already have recordings +title: 'GTN Video Library 2.0: 107 hours of learning across 154 videos' + +--- +Many GTN tutorials already have recordings. These recordings were made by members of the community for a variety of (online) training events. Up until now, this video library were part of the Gallantries Project. We have now integrated this video library directly into the GTN, and made it even easier to add video recordings to GTN tutorials or slide decks! Just use a Google Form to submit your video recordings! \ No newline at end of file diff --git a/content/news/2024-07-08-4th-mycobamycobacterium-tuberculosis-complex-ngs-made-easy/index.md b/content/news/2024-07-08-4th-mycobamycobacterium-tuberculosis-complex-ngs-made-easy/index.md new file mode 100644 index 0000000000..7424f8cb57 --- /dev/null +++ b/content/news/2024-07-08-4th-mycobamycobacterium-tuberculosis-complex-ngs-made-easy/index.md @@ -0,0 +1,24 @@ +--- +authors: Daniela Brites, Christoph Stritt, Andrea Cabibbe, Arash Ghodousi, Peter van + Heusden, Liliana Rutaihwa, Galo A. Goig +date: '2024-07-08' +external_url: https://training.galaxyproject.org/training-material/news/2024/07/08/4th-mycobamycobacterium-tuberculosis-complex-ngs-made-easy.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- NGS +- Tuberculosis +- Drug-resistance +- transmission +- evolution +- one-health +tease: Tuberculosis (TB) is a big killer in many countries of the world, particularly + in those with low and middle income +title: 4th Mycobacterium tuberculosis complex NGS made easy + +--- +Tuberculosis (TB) is a big killer in many countries of the world, particularly in those with low and middle income. Next-generation sequencing has been key in improving our understanding of drug resistance acquisition and of transmission of Mycobacterium tuberculosis. Yet, the need for expertise guiding NGS implementation in laboratories and the lack of bioinformatic expertise, are main obstacles hindering the implementation of NGS into TB programs. \ No newline at end of file diff --git a/content/news/2024-07-09-gcc-updates/index.md b/content/news/2024-07-09-gcc-updates/index.md new file mode 100644 index 0000000000..d15711249c --- /dev/null +++ b/content/news/2024-07-09-gcc-updates/index.md @@ -0,0 +1,18 @@ +--- +authors: Saskia Hiltemann, Helena Rasche +date: '2024-07-09' +external_url: https://training.galaxyproject.org/training-material/news/2024/07/09/gcc-updates.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- gcc +- gtn infrastructure +tease: We recently presented the GTN at the 2024 Galaxy Community Conference +title: So many new features! GTN 2023-2024 Updates + +--- +We recently presented the GTN at the 2024 Galaxy Community Conference. This presentation was a summary of the updates and new features that were added to the GTN in the past year. \ No newline at end of file diff --git a/content/news/2024-07-11-CC2024-registration/index.md b/content/news/2024-07-11-CC2024-registration/index.md new file mode 100644 index 0000000000..c8a22e29a2 --- /dev/null +++ b/content/news/2024-07-11-CC2024-registration/index.md @@ -0,0 +1,18 @@ +--- +authors: "Teresa M\xFCller" +date: '2024-07-11' +external_url: https://training.galaxyproject.org/training-material/news/2024/07/11/CC2024-registration.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +tease: Are you interested in training and want to connect with other enthusiastic + trainers? Then join the BioNT Community Event & CarpentryConnect - Heidelberg + 2024 +title: Registration Open for BioNT Community Event & CarpentryConnect Heidelberg + +--- +Are you interested in training and want to connect with other enthusiastic trainers? Then join the BioNT Community Event & CarpentryConnect - Heidelberg 2024. The Carpentries and other learning communities will meet to network and collaborate during this 3-day event. The GTN will be present with a Poster, Lightning Talks and a Mini-hackathon. \ No newline at end of file diff --git a/content/news/2024-07-12-tutorial-snapatac-standard/index.md b/content/news/2024-07-12-tutorial-snapatac-standard/index.md new file mode 100644 index 0000000000..a0a71de3e6 --- /dev/null +++ b/content/news/2024-07-12-tutorial-snapatac-standard/index.md @@ -0,0 +1,21 @@ +--- +authors: Timon Schlegel +date: '2024-07-12' +external_url: https://training.galaxyproject.org/training-material/news/2024/07/12/tutorial-snapatac-standard.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- new tutorial +- single-cell +- epigenetics +tease: We are proud to announce that a new training, explaining the analysis of single + cell ATAC-seq data with SnapATAC2 and Scanpy, is now available in the Galaxy Training + Network. +title: 'New Tutorial: Single-cell ATAC-seq standard processing with SnapATAC2' + +--- +We are proud to announce that a new training, explaining the analysis of single cell ATAC-seq data with SnapATAC2 and Scanpy, is now available in the Galaxy Training Network. \ No newline at end of file diff --git a/content/news/2024-07-17-google-forms/index.md b/content/news/2024-07-17-google-forms/index.md new file mode 100644 index 0000000000..28edeec8e2 --- /dev/null +++ b/content/news/2024-07-17-google-forms/index.md @@ -0,0 +1,21 @@ +--- +authors: Helena Rasche, Saskia Hiltemann +date: '2024-07-17' +external_url: https://training.galaxyproject.org/training-material/news/2024/07/17/google-forms.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- gtn infrastructure +- new feature +- automation +tease: "Since the last time we announced GTN news posting via Google Form, we\u2019\ + ve found that this has been an excellent fit for the community and decided to greatly\ + \ expand the use of Google Forms for GTN contributions." +title: Simplifying GTN contribution with Google Forms + +--- +Since the last time we announced GTN news posting via Google Form, we’ve found that this has been an excellent fit for the community and decided to greatly expand the use of Google Forms for GTN contributions. \ No newline at end of file diff --git a/content/news/2024-07-22-Galaxy-Administrator-Time-Burden-and-Technology-Usage/index.md b/content/news/2024-07-22-Galaxy-Administrator-Time-Burden-and-Technology-Usage/index.md new file mode 100644 index 0000000000..ad3a572ded --- /dev/null +++ b/content/news/2024-07-22-Galaxy-Administrator-Time-Burden-and-Technology-Usage/index.md @@ -0,0 +1,21 @@ +--- +authors: Vlad Visan +date: '2024-07-22' +external_url: https://training.galaxyproject.org/training-material/news/2024/07/22/Galaxy-Administrator-Time-Burden-and-Technology-Usage.html +main_subsite: global +subsites: +- all +tags: +- training +- gtn-news +- news +- deploying +- maintenance +- survey +tease: Have you wondered how difficult Galaxy is to run? How much time people must + spend to run Galaxy? In February 2024, we collected 9 responses from the Galaxy + Small Scale Admin group +title: Galaxy Administrator Time Burden and Technology Usage + +--- +Have you wondered how difficult Galaxy is to run? How much time people must spend to run Galaxy? In February 2024, we collected 9 responses from the Galaxy Small Scale Admin group. The questions cover various time burdens and technological choices. The report provides answers to prospective future admins’ most common questions. \ No newline at end of file