NAMESPACE

# Generated by roxygen2: do not edit by hand

export(AddMarkersToTree)
export(AddProportionTest)
export(AddTreeAttribute)
export(AddassGeneToTree)
export(AllUpperLevelInfo)
export(GetDifferentialGenes)
export(HeatmapSpecies)
export(MappingHeatmap)
export(MarkCells)
export(MarkMixedNode)
export(NormTree)
export(NormTreeWithinFactor)
export(PlotTreeConservationPie)
export(TransferDend)
export(TreeConservationPie)
export(TreeEntropy)
export(TreeStability)
export(TreeStabilityDend)
export(TreeStabilityFlat)
export(UpperLevelInfo)
export(addWithinSpeciesComp)
export(assign_values_to_nodes)
export(buildSpeciesTree)
export(cluster.matrix.expression.distances)
export(clusterMappingSummary)
export(dendSetColor2factorNormMixing)
export(dendSetColorByMixing)
export(dendSetColorByNormMixing)
export(dendSetWidthBysize)
export(expHeatMap)
export(getClusters)
export(getLeafClusters)
export(getLeafcontentFlat)
export(getUpperLevelNode)
export(mappingLabel)
export(pairwiseNormTree)
export(plot3factorLengend)
export(plotStability)
export(plotStabilityDistr)
export(propTestGene)
export(pruneTree)
export(pruneTreeEntropy)
export(pruneTreeWithSpecies)
export(rleiden.detection)
export(subSampleTree)
export(subSamplingGraph)
import(RColorBrewer)
import(colorspace)
import(dendextend)
import(entropy)
import(plotrix)
import(sccore)