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I also observed this. Probably the reason is when a compound node is collapsed, its children are removed from cy.
When we expand a meta edge, source or target of an edge might be inside a compound node. In this case, since source or target of an edge won't be found, cytoscape.js gives an error.
below are my error logs.
core.js:6228 ERROR Error: Can not create edge e1630253 with nonexistant source n1
at error (cytoscape.cjs.js:828)
at Collection.push../node_modules/cytoscape/dist/cytoscape.cjs.js.elesfn$u.restore (cytoscape.cjs.js:12962)
at Core.add (cytoscape.cjs.js:13356)
at Object.expandEdge (expandCollapseUtilities.js:782)
at index.js:248
at Element.forEach (cytoscape.cjs.js:11196)
at Object.api.expandEdges (index.js:247)
We get an exception.
When we do this in reverse order, collapse the compound first and then collapse inter-graph meta edges, we might have similar problems.
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