Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update to detect CM4AI ro-crate as input and use information within to get cell line, treatment, gene set and other meta data #6

Open
coleslaw481 opened this issue Mar 11, 2024 · 0 comments
Assignees
Labels
enhancement New feature or request
Milestone

Comments

@coleslaw481
Copy link
Contributor

Update this tool (command line and programmatically) to allow --cm4ai_table or add new flag --cm4ai that can take CM4AI RO-Crate and use (if found) the meta data file stored within (depends on idekerlab/cellmaps_utils#6) to get provenance information. If this meta data file is there then the user does NOT have to pass in --provenance or just has to pass in a reduced amount of provenance such as name and organization.

@coleslaw481 coleslaw481 added the enhancement New feature or request label Mar 11, 2024
@coleslaw481 coleslaw481 added this to the 0.2.0 milestone Mar 11, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

2 participants