pom.xml

<?xml version="1.0" encoding="UTF-8" ?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>

	<groupId>org.ndexbio</groupId>
	<artifactId>ndexEdgeFilterQuery4Hiview</artifactId>
	<version>0.2</version>
	<packaging>war</packaging>

	<name>ndex-neighborhoodquery</name>
	<url>http://maven.apache.org</url>

	<repositories>
	<repository>
			<id>cytoscape_releases</id>
			<snapshots>
				<enabled>false</enabled>
			</snapshots>
			<releases>
				<enabled>true</enabled>
			</releases>
			<name>Cytoscape Releases</name>
			<url>http://nrnb-nexus.ucsd.edu/repository/cytoscape_releases/</url>
		</repository>
	</repositories>
		
	<properties>
		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
		<resteasy.version>3.1.4.Final</resteasy.version>
		<junit.version>4.11</junit.version>
		<servlet-api.version>4.0.0</servlet-api.version>
		<jetty.version>9.4.8.v20171121</jetty.version>

		<maven-shade-plugin.version>3.1.0</maven-shade-plugin.version>
		<maven-compiler-plugin.version>3.5.1</maven-compiler-plugin.version>
	</properties>

	<dependencies>
		<dependency>
			<groupId>org.jboss.resteasy</groupId>
			<artifactId>resteasy-jaxrs</artifactId>
			<version>${resteasy.version}</version>
		</dependency>
		<dependency>
			<groupId>org.jboss.resteasy</groupId>
			<artifactId>resteasy-servlet-initializer</artifactId>
			<version>${resteasy.version}</version>
		</dependency>
		<dependency>
			<groupId>org.jboss.resteasy</groupId>
			<artifactId>resteasy-jackson2-provider</artifactId>
			<version>${resteasy.version}</version>
		</dependency>

		<dependency>
			<groupId>org.jboss.resteasy</groupId>
			<artifactId>resteasy-multipart-provider</artifactId>
			<version>${resteasy.version}</version>
		</dependency>
		<dependency>
			<groupId>org.jboss.resteasy</groupId>
			<artifactId>resteasy-jaxb-provider</artifactId>
			<version>${resteasy.version}</version>
		</dependency>
		<!-- Jetty runtime dependencies -->
		<dependency>
			<groupId>javax.servlet</groupId>
			<artifactId>javax.servlet-api</artifactId>
			<version>${servlet-api.version}</version>
		</dependency>
		<dependency>
			<groupId>org.eclipse.jetty</groupId>
			<artifactId>jetty-servlet</artifactId>
			<version>${jetty.version}</version>
		</dependency>

		<dependency>
			<groupId>org.apache.solr</groupId>
			<artifactId>solr-solrj</artifactId>
			<version>6.5.1</version>
		</dependency>

		<dependency>
			<groupId>org.ndexbio</groupId>
			<artifactId>ndex-object-model</artifactId>
			<version>2.5.2</version>
		</dependency>
		<dependency>
			<groupId>ch.qos.logback</groupId>
			<artifactId>logback-classic</artifactId>
			<version>1.2.3</version>
		</dependency>
	</dependencies>


	<build>
		<finalName>edgeFilter</finalName>
		<plugins>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-compiler-plugin</artifactId>
				<version>3.8.0</version>
				<configuration>
					<release>11</release>	
				</configuration>
			</plugin>

<!--  			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-shade-plugin</artifactId>
				<version>${maven-shade-plugin.version}</version>
				<configuration>
					<createDependencyReducedPom>
						true
					</createDependencyReducedPom>
					<filters>
						<filter>
							<artifact>*:*</artifact>
							<excludes>
								<exclude>META-INF/*.SF</exclude>
								<exclude>META-INF/*.DSA</exclude>
								<exclude>META-INF/*.RSA</exclude>
							</excludes>
						</filter>
					</filters>
				</configuration>
				<executions>
					<execution>
						<phase>package</phase>
						<goals>
							<goal>shade</goal>
						</goals>
						<configuration>
										<source>1.8</source>
					<target>1.8</target>
							<transformers>
							
								<transformer
									implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
								<transformer
									implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
									<mainClass>
										org.ndexbio.App
									</mainClass>
								</transformer>
							</transformers>
						</configuration>
					</execution>
				</executions>
			</plugin>  -->
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-war-plugin</artifactId>
				<version>3.3.2</version>
				<configuration>
				    <shortRevisionLength>5</shortRevisionLength>
					<archiveClasses>true</archiveClasses>
					<archive>
            			<manifest>
              				<addDefaultImplementationEntries>true</addDefaultImplementationEntries>
            			</manifest>
           			</archive>
				</configuration>
			</plugin>
		</plugins>
	</build>
</project>