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Test neuroglancer with prediction output of Object Classification Workflow #58

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m-novikov opened this issue Mar 17, 2020 · 1 comment
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@m-novikov
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m-novikov commented Mar 17, 2020

We need to check how well neuroglancer handlers indexed color. We are interested in object classification output that is single-channel image with object index as value.
Supposedly neuroglancer segmentation layer does the job.
TODO:

  • Test dataset uploaded to n5test
  • Neuroglancer link demonstrating this dataset
@Tomaz-Vieira
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Tomaz-Vieira commented Mar 18, 2020

Here's a sample output from object classification, as run by cloud ilastik:

swift download -p out_Object-Predictions_0fb1c52a-1236-459e-9f07-e2dc4935f730.n5 n5test

I should add that the repeating tiled image is not a bug. I just copy-pasted the same input image multiple times to make a bigger one

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