LongReads: create validation for different dorado versions

[leonschuetz]

• create script
• dorado versions to test:
  • 0.6.0
  • 0.7.3
  • 0.8.0
  • 0.8.3

[leonschuetz]

• 0.8.3 SUP

[leonschuetz]

Superaccuracy result:

#name	date	average_depth	expected_snvs	expected_indels	snv_sensitivity	snv_ppv	snv_f1	snv_genotyping_accuracy	indel_sensitivity	indel_ppv	indel_f1	indel_genotyping_accuracy	all_sensitivity	all_ppv	all_f1	all_genotyping_accuracy
23014LRa028_01_dorado_083	2024-11-21 07:32:16	47.41	3367463	559025	0.9982	0.9980	0.9981	0.9997	0.7799	0.9588	0.8601	0.9930	0.9671	0.9800	0.9933	0.9989
23014LRa028_01_dorado_083_sup	2025-02-05 02:06:49	48.13	3367463	559025	0.9975	0.9990	0.9982	0.9998	0.8021	0.9772	0.8810	0.9937	0.9697	0.9828	0.9964	0.9991
---	---	---	---	---	---	---	---	---	---	---	---	---	---	---	---	---
23014LRa028_01_dorado_083_coding	2024-11-21 07:32:16	47.41	21398	526	0.9982	0.9965	0.9973	0.9997	0.9392	0.9592	0.9491	0.9980	0.9968	0.9962	0.9956	0.9997
23014LRa028_01_dorado_083_sup_coding	2025-02-05 02:06:49	48.13	21398	526	0.9971	0.9985	0.9978	0.9998	0.9506	0.9823	0.9662	0.9980	0.9959	0.9970	0.9981	0.9998

[leonschuetz]

• 0.9.0

[leonschuetz]

• 0.9.1
• Test different qscores (SVs)
  • min_qscore 1
  • min_qscore 5