docker-compose.yaml

version: '3.9'
networks:
    portal_network:
        driver: bridge
services:
    portal_db:
        image: mysql:5.7
        env_file: env
        restart: unless-stopped
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        ports:
          - "3306:3306"
        volumes:
          - ./mysqlappdb:/var/lib/mysql:rw
        container_name: portal_db
        command: ["--explicit-defaults-for-timestamp=ON"]
        healthcheck:
            test: ["CMD", "mysqladmin" ,"ping", "-h", "localhost"]
            timeout: 20s
            retries: 5
        networks:
          - portal_network
    redis_db:
        image: redis:6.2
        restart: unless-stopped
        container_name: redis_db
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        ports:
          - 6379:6379
        networks:
          - portal_network
    webserver:
        image: imperialgenomicsfacility/igfportal:v0.0.2.1
        env_file: env
        user: "${UID}:${GID}"
        ports:
          - 8080:8080
        restart: unless-stopped
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        links:
          - portal_db
          - redis_db
        depends_on:
          - portal_db
          - redis_db
        volumes:
          - /home/vmuser/github/IGFPortal:/github/IGFPortal:ro
          - /home/vmuser/github/ssl:/SSL:ro
          - ./static:/data/static:rw
          - /home/vmuser/secrets/airflow_conf.json:/secret/airflow_conf.json:ro
          - ./celery_tmp:/TMP_WORK_DIR:rw
        container_name: webserver
        command: ["flask run -h 0.0.0.0 -p 8080 --reload --debugger --without-threads"]
        networks:
          - portal_network
    nginx:
        image: nginx:1.23.3
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        ports:
          - "80:80"
          - "443:443"
        links:
          - webserver
        depends_on:
          - webserver
        volumes:
          - /home/vmuser/github/ssl:/SSL:ro
          - /home/vmuser/github/IGFPortal/nginx.conf:/etc/nginx/nginx.conf:ro
          - /tmp/nginx:/var/nginx/:rw
        container_name: nginx
        restart: unless-stopped
        networks:
          - portal_network
    celery_worker1:
        image: imperialgenomicsfacility/igfportal:v0.0.2.1
        env_file: env
        user: "${UID}:${GID}"
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        links:
          - portal_db
          - redis_db
        depends_on:
          - portal_db
          - redis_db
        restart: unless-stopped
        volumes:
          - /home/vmuser/github/IGFPortal:/github/IGFPortal:ro
          - /home/vmuser/secrets/airflow_conf.json:/secret/airflow_conf.json:ro
          - ./celery_tmp:/TMP_WORK_DIR:rw
          - ./static:/data/static:rw
        container_name: celery_worker1
        command: ["celery -A app.celery worker --loglevel=WARNING"]
        networks:
          - portal_network
    celery_flower:
        image: imperialgenomicsfacility/igfportal:v0.0.2.1
        env_file: env
        restart: unless-stopped
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        ports:
          - "5555:5555"
        links:
          - redis_db
          - portal_db
        depends_on:
          - redis_db
          - portal_db
        volumes:
          - /home/vmuser/github/IGFPortal:/github/IGFPortal:ro
        container_name: celery_flower
        command: ["celery -A app.celery flower --basic_auth=$${BASIC_AUTH}"]
        networks:
          - portal_network
    adminer:
        image: adminer:latest
        logging:
          driver: "json-file"
          options:
            max-size: "2048m"
        links:
          - portal_db
        ports:
          - "8081:8080"
        restart: unless-stopped
        container_name: adminer
        networks:
          - portal_network