docker-compose-igf-lims.yaml

version: '3.9'
networks:
    portal_network:
        driver: bridge
services:
    portal_db:
        image: mysql:5.7
        env_file: env
        restart: always
        volumes:
          - /home/igf/igf_portal/mysqlappdb:/var/lib/mysql:rw
        container_name: portal_db
        networks:
          - portal_network
    redis_db:
        image: redis:6.2
        restart: always
        container_name: redis_db
        networks:
          - portal_network
    webserver:
        image: imperialgenomicsfacility/igfportal:v1
        env_file: env
        ports:
          - "8089:8080"
        restart: always
        links:
          - portal_db
          - redis_db
        depends_on:
          - portal_db
          - redis_db
        volumes:
          - /home/igf/igf_portal/github/IGFPortal:/github/IGFPortal:ro
          - /home/igf/igf_portal/ssl_cert:/SSL:ro
          - /tmp:/TMP_WORK_DIR:rw
        container_name: webserver
        command: ["gunicorn -b 0.0.0.0:8080 --certfile=/SSL/portal.cert --keyfile=/SSL/portal.key --threads 4 server:app"]
        networks:
          - portal_network
    celery_worker1:
        image: imperialgenomicsfacility/igfportal:v1
        env_file: env
        links:
          - portal_db
          - redis_db
        depends_on:
          - portal_db
          - redis_db
        restart: always
        volumes:
          - /home/igf/igf_portal/github/IGFPortal:/github/IGFPortal:ro
          - /home/igf/igf_portal/secret/airflow_conf.json:/secret/airflow_conf.json:ro
          - /tmp:/TMP_WORK_DIR:rw
        container_name: celery_worker1
        command: ["celery -A app.celery worker --loglevel=INFO"]
        networks:
          - portal_network
    celery_flower:
        image: imperialgenomicsfacility/igfportal:v1
        env_file: env
        restart: always
        ports:
          - "5556:5555"
        links:
          - redis_db
          - portal_db
        depends_on:
          - redis_db
          - portal_db
        volumes:
          - /home/igf/igf_portal/github/IGFPortal:/github/IGFPortal:ro
        container_name: celery_flower
        command: ["celery -A app.celery flower --basic_auth=$${BASIC_AUTH}"]
        networks:
          - portal_network
    adminer2:
        image: adminer:latest
        links:
          - portal_db
        ports:
          - "8082:8080"
        restart: always
        container_name: adminer2
        networks:
          - portal_network