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cnvplots

Python web application to create interactive copy number variation plots

Note: This module inspired from dash-bio Manhantan plot

Input

cnvkit output files such as copy number ratio(.cnr) and segmentation (.cns) files. Dash and Plotly used to build this interactive cnv plots and tables.

How To run this app

git clone https://github.com/imsarath/cnvplots.git
cd cnvplots
pip install -r requirements.txt

python app.py

Open http://127.0.0.1:8050/ in your browser