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abcds.yaml
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abcds.yaml
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study_id: ABC-DS
study_accession:
study_title: Alzheimer's Biomarker Consortium - Down Syndrome
study_desc: The goal of the Alzheimer Biomarker Consortium – Down Syndrome (ABC-DS) is to study a group of adults with Down syndrome over their lives to single out early biomarkers of the onset of Alzheimer's disease.
url: https://includedcc.org/studies/alzheimer-biomarker-consortium-down-syndrome-abc-ds
identifier_prefix: https://includedcc.org/fhir/abc-ds
dd_prefix: https://includedcc.org/fhir
output_filename: abcds
id_colname: Participant ID
whistle_src: projector/study_only/_entry.wstl
code_harmonization_dir: harmony/common
require_official: True
curies:
http://purl.obolibrary.org/obo/hp.owl: HP
http://purl.obolibrary.org/obo/mondo.owl: MONDO
http://purl.obolibrary.org/obo/maxo.owl: MAXO
http://purl.obolibrary.org/obo/ncit.owl: NCIT
projector_lib: projector/study_only/current
env:
local: dev
dev: dev
qa: qa-kf2-inc
prod: prod-kf2-inc
dataset:
study_meta:
filename: data/tables/ABC-DS/study.csv
data_dictionary:
filename: data/dd/study.csv
code_harmonization: harmony/common/data-harmony.csv
study_contacts:
hidden: true
filename: data/tables/ABC-DS/contacts.csv
data_dictionary:
filename: data/dd/contacts.csv
code_harmonization: harmony/common/data-harmony.csv
embed:
dataset: study_meta
colname: Study Code
# dataset_meta:
# filename: data/tables/abcds/datasets.csv
# data_dictionary:
# filename: data/dd/dataset_meta.csv
# code_harmonization: harmony/common/data-harmony.csv
# embed:
# dataset: study_meta
# colname: Study Code
participant:
filename: data/tables/ABC-DS/participant.csv
data_dictionary:
filename: data/dd/participant.csv
code_harmonization: harmony/common/data-harmony.csv
active_tables:
ALL: true
# family: true