From 574343b3c9c59e0a59dabd33f72aa8fb43679a35 Mon Sep 17 00:00:00 2001 From: Nico Matentzoglu Date: Thu, 12 Oct 2023 13:47:54 +0300 Subject: [PATCH] Fix templare and merge inn and latin --- src/ontology/omo-edit.owl | 30 ++++++++++++++++++++++++- src/templates/annotation_properties.tsv | 4 ++-- 2 files changed, 31 insertions(+), 3 deletions(-) diff --git a/src/ontology/omo-edit.owl b/src/ontology/omo-edit.owl index ead060b..becbbb5 100644 --- a/src/ontology/omo-edit.owl +++ b/src/ontology/omo-edit.owl @@ -717,6 +717,34 @@ EquivalentTo: xsd:integer[> 2151 , <= 2300] + + + + CHEBI:46195 has been assigned the english International Nonproproprietary Name (INN) "paracetamol". In some cases such as this one, the INN might be the same as the ontology's primary label + The International Nonproprietary Name (INN) is a standardize name for a pharmaceutical drug or active ingredient issued by the World Health Organization (WHO) meant to address the issues with country- or language-specific brand names. These are issued in several languages, including English, Latin, French, Russian, Spanish, Arabic, and Chinese. + + + 2023-09-30 + International Nonproprietary Name + + + + + + + + + nasopharynx (UBERON:0001728) has the latin name "pars nasalis pharyngis + A synonym type for describing Latin term synonyms. + + + 2023-10-12 + latin term + + + + + @@ -1590,5 +1618,5 @@ No imports - + diff --git a/src/templates/annotation_properties.tsv b/src/templates/annotation_properties.tsv index 0314975..c8b7c96 100644 --- a/src/templates/annotation_properties.tsv +++ b/src/templates/annotation_properties.tsv @@ -1,4 +1,4 @@ -relation id (required) type label (required) definition (required) parent property contributon ORCID (required) Date created (required) example of use term tracker item + relation id (required) type label (required) definition (required) parent property contributon ORCID (required) Date created (required) example of use term tracker item ID TYPE AT rdfs:label^^xsd:string AT IAO:0000115^^xsd:string SP % AI dc:contributor AT dc:created^^xsd:date AT IAO:0000112^^xsd:string AI IAO:0000233 OMO:0003000 owl:AnnotationProperty abbreviation A synonym type for describing abbreviations or initalisms oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 CHEBI:26523 (reactive oxygen species) has an exact synonym (ROS), which is of type OMO:0003000 (abbreviation) https://github.com/information-artifact-ontology/ontology-metadata/issues/122 OMO:0003001 owl:AnnotationProperty ambiguous synonym A synonym type for describing ambiguous synonyms oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 https://github.com/information-artifact-ontology/ontology-metadata/issues/122 @@ -11,4 +11,4 @@ OMO:0003007 owl:AnnotationProperty misnomer A synonym type for misnomers, i.e., OMO:0003008 owl:AnnotationProperty previous name A synonym type for names that have been used as primary labels in the past. oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-07-25 MAPT, the gene that encodes the Tau protein, has a previous name DDPAC. Note: in this case, the name type is more specifically the gene symbol. https://github.com/information-artifact-ontology/ontology-metadata/issues/139 OMO:0003009 owl:AnnotationProperty legal name A synonym type for the legal entity name oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-07-27 The legal name for Harvard University (https://ror.org/03vek6s52) is President and Fellows of Harvard College https://github.com/information-artifact-ontology/ontology-metadata/issues/141 OMO:0003010 owl:AnnotationProperty International Nonproprietary Name The International Nonproprietary Name (INN) is a standardize name for a pharmaceutical drug or active ingredient issued by the World Health Organization (WHO) meant to address the issues with country- or language-specific brand names. These are issued in several languages, including English, Latin, French, Russian, Spanish, Arabic, and Chinese. oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-09-30 "CHEBI:46195 has been assigned the english International Nonproproprietary Name (INN) ""paracetamol"". In some cases such as this one, the INN might be the same as the ontology's primary label" https://github.com/information-artifact-ontology/ontology-metadata/issues/149 -OMO:0003011 owl:AnnotationProperty latin term A synonym type for describing Latin term synonyms. oboInOwl:SynonymType https://orcid.org/0000-0002-1773-2692 nasopharynx (UBERON:0001728) has the latin name "pars nasalis pharyngis" https://github.com/information-artifact-ontology/ontology-metadata/issues/146 +OMO:0003011 owl:AnnotationProperty latin term A synonym type for describing Latin term synonyms. oboInOwl:SynonymType https://orcid.org/0000-0002-1773-2692 2023-10-12 nasopharynx (UBERON:0001728) has the latin name "pars nasalis pharyngis" https://github.com/information-artifact-ontology/ontology-metadata/issues/146