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Hi!
There is a typo in the panGWAS_user_manual.pdf, unfortunately in the Usage Example ;)
Rscript /path/of/make_pangenome.r –contigFile contigs.txt –prodigal yes – similarity 0.7 –coverage 0.7 –prefix test –externaSoftwarePaths soft.txt
externaSoftwarePaths should be changed to externalSoftwarePaths
Best wishes,
Kaisa
The text was updated successfully, but these errors were encountered:
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Hi!
There is a typo in the panGWAS_user_manual.pdf, unfortunately in the Usage Example ;)
Rscript /path/of/make_pangenome.r –contigFile contigs.txt –prodigal yes – similarity 0.7 –coverage 0.7 –prefix test –externaSoftwarePaths soft.txt
externaSoftwarePaths should be changed to externalSoftwarePaths
Best wishes,
Kaisa
The text was updated successfully, but these errors were encountered: