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Replace GATK3 mergeVariants #25

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jfnavarro opened this issue Feb 17, 2021 · 0 comments
Open

Replace GATK3 mergeVariants #25

jfnavarro opened this issue Feb 17, 2021 · 0 comments
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enhancement New feature or request

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@jfnavarro
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Use jacquard merge instead of GATK3 to merge variants (with this the awk hacks to replace IUPA REF can be removed)
Other similar tool can be used instead of jacquard merge if the behaviour is the same.
@jfnavarro jfnavarro added the enhancement New feature or request label Feb 17, 2021
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