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DESCRIPTION
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DESCRIPTION
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Package: trackViewer
Type: Package
Title: A R/Bioconductor package with web interface for drawing elegant interactive tracks or lollipop plot to facilitate integrated analysis of multi-omics data
Version: 1.43.5
Authors@R: c(person(given="Jianhong", family="Ou", email="[email protected]",
role=c("aut", "cre"), comment=c(ORCID="0000-0002-8652-2488")),
person(given="Julie Lihua", family="Zhu",
role="aut", email="[email protected]"))
Maintainer: Jianhong Ou <[email protected]>
Description: Visualize mapped reads along with annotation as track layers for NGS dataset
such as ChIP-seq, RNA-seq, miRNA-seq, DNA-seq, SNPs and methylation data.
License: GPL (>= 2)
Depends: R (>= 3.5.0), grDevices, methods, GenomicRanges, grid
Imports: GenomeInfoDb, GenomicAlignments, GenomicFeatures, Gviz, Rsamtools, S4Vectors,
rtracklayer, BiocGenerics, scales, tools, IRanges, AnnotationDbi, grImport,
htmlwidgets, InteractionSet, utils, rhdf5,
strawr, txdbmaker
Suggests: biomaRt, TxDb.Hsapiens.UCSC.hg19.knownGene, RUnit, org.Hs.eg.db,
BiocStyle, knitr, VariantAnnotation, httr, htmltools, rmarkdown,
motifStack
biocViews: Visualization
VignetteBuilder: knitr
RoxygenNote: 7.3.2
Encoding: UTF-8