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how to get the best pose #13

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Chengeng-Yang opened this issue Jun 20, 2023 · 2 comments
Open

how to get the best pose #13

Chengeng-Yang opened this issue Jun 20, 2023 · 2 comments

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@Chengeng-Yang
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Thank you for sharing this amazing work and a few examples!

I just wanted to ask how could we know which pose is ranked as the best. I tested your model by running src/db5_inference.sh and I found 40 poses generated in the visualization path, but I was not sure which one is the best pose. By the way, does the numbering of 0-40 refer to the diffusion time? Many thanks!

@TernencezzZ
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TernencezzZ commented Nov 8, 2023

Hi, @Chengeng-Yang
Based on my experience, the larger the suffix numeral in generated filenames of protein, the better the effect, which may be opposite to the "t" value in diffusion process.

@ahof1704
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Shouldn't we have a file that summarizes the energy or quality of the docking?

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