From d9edaf2e9b41f2149d580fe49ee0843f6ee8350b Mon Sep 17 00:00:00 2001 From: Ali Khan Date: Wed, 8 Jan 2025 14:47:27 -0500 Subject: [PATCH] update CLI info for no_unfoldedreg we don't yet actually check to see if metrics exist before trying to run unfolded reg --- hippunfold/config/snakebids.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/hippunfold/config/snakebids.yml b/hippunfold/config/snakebids.yml index edc29cbb..f66b1587 100644 --- a/hippunfold/config/snakebids.yml +++ b/hippunfold/config/snakebids.yml @@ -179,7 +179,7 @@ parse_args: help: 'Select the atlas (unfolded space) to use for subfield labels. (default: %(default)s)' --no_unfolded_reg: - help: 'Do not perform unfolded space (2D) registration based on surface metrics (e.g. thickness, curvature, and gyrification) for closer alignment to the reference atlas. NOTE: unfolded_reg is automatically skipped if an atlas without metrics is chosen. (default: %(default)s)' + help: "Do not perform unfolded space (2D) registration based on surface metrics (e.g. thickness, curvature, and gyrification) for closer alignment to the reference atlas. (default: %(default)s)" default: False action: store_true