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Implementation timeline #1

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3 of 5 tasks
krrome opened this issue Jun 13, 2018 · 0 comments
Open
3 of 5 tasks

Implementation timeline #1

krrome opened this issue Jun 13, 2018 · 0 comments

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@krrome
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krrome commented Jun 13, 2018

Core functionality

  • Copy core variant effect prediction functionality from Kipoi
  • Resolve variant-effect related issues here (models with multidimensional outputs, output selection, etc.)
  • Implement different solutions of indel variant effect prediction

Interaction with Kipoi

  • CLI needs to be loadable from kipoi_veff package
  • yaml parsing classes need to be loadable from kipoi_veff package
Avsecz pushed a commit that referenced this issue Dec 16, 2019
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