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DESCRIPTION
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DESCRIPTION
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Package: bioCancer
Title: Interactive Multi-Omics Cancers Data Visualization and Analysis
Version: 1.30.8
Date: 2024-02-14
Authors@R: person("Karim", "Mezhoud", role=c("aut", "cre"), email="[email protected]")
Description: This package is a Shiny App to visualize and analyse interactively
Multi-Assays of Cancer Genomic Data.
Depends:
R (>= 3.6.0),
radiant.data (>= 0.9.1),
cBioPortalData,
XML(>= 3.98)
Imports:
R.oo,
R.methodsS3,
DT (>= 0.3),
dplyr (>= 0.7.2),
tidyr,
shiny (>= 1.0.5),
AlgDesign (>= 1.1.7.3),
import (>= 1.1.0),
methods,
AnnotationDbi,
shinythemes,
Biobase,
geNetClassifier,
org.Hs.eg.db,
org.Bt.eg.db,
DOSE,
clusterProfiler,
reactome.db,
ReactomePA,
DiagrammeR(<= 1.01),
visNetwork,
htmlwidgets,
plyr,
tibble,
GO.db
Suggests:
BiocStyle,
prettydoc,
rmarkdown,
knitr,
testthat (>= 0.10.0)
VignetteBuilder:
knitr
URL: https://kmezhoud.github.io/bioCancer/
BugReports: https://github.com/kmezhoud/bioCancer/issues
License: AGPL-3 | file LICENSE
LazyData: true
biocViews: GUI, DataRepresentation, Network, MultipleComparison, Pathways, Reactome, Visualization,GeneExpression,GeneTarget
RoxygenNote: 7.3.1
Encoding: UTF-8