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how to extend knossos #495

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thorstenwagner opened this issue Jun 17, 2020 · 1 comment
Open

how to extend knossos #495

thorstenwagner opened this issue Jun 17, 2020 · 1 comment
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@thorstenwagner
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Hi!

I'm looking for a guide to write an extension for specific image format (.mrc https://pypi.org/project/mrcfile/ ). I've read on your webpage that this is possible but I can't find any explanation.

Could you provide some details?

Best,
Thorsten

@Optiligence
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We usually just convert files to tiff stacks and generate KNOSSOS datasets from those. (which can then also be streamed with any file server)
If conversion is to be avoided https://github.com/knossos-project/knossos_cuber/tree/dev could be adjusted to provide directly loading from mrc.

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