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Automatic Microstructure Evaluation

Approach

To perform segmentation of the input images into cells a U-Net inspired fully convolutional network is applied to predict flow fields. For every pixel of the input a simulation of the dynamics in the flow field is performed. Pixels that trend toward the same point are assigned to the same cells.

Dataset

The dataset is unfortunately non-public for now. Any derivatives such as the models and its predictions also may not be published. Once this method is further refined, I expect this to change.

See also

Project Cellpose which proposed this or at least a similar method to segment biological cells.