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changelog.md

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Changelog

All notable changes to this project will be documented in this file.

0.4.4 (2022-06-30) aaaaaaaaaaaaaaaaaa

  • Nothing changed yet.

0.4.2 (2022-06-21) aaaaaaaaaaaaaaaaaa

  • Nothing changed yet.

0.4.1 (2022-06-20) aaaaaaaaaaaaaaaaaa

  • Nothing changed yet.

0.4.0 (2022-06-20) and this project adheres to Semantic Versioning.

[Unreleased]

[0.3.8] - 2021-07-04

Added

  • Bug fixed

[0.3.7] - 2021-07-04

Added

  • Bug fixed

[0.3.6] - 2021-07-04

Added

  • Bug fixed

[0.3.5] - 2021-07-04

Added

VQL

  • Add new operator HAS to filter a string in a string list separated by "&" . For instance "intron&exon"
  • Make possible to create a condition within all samples. For instance " SELECT pos FROM variants WHERE sample[*].gt = 1 "

Variant view

  • Add Tags option
  • Refactor Formatter plugin.

Filter Editor & Fields Editor

  • You can now drag and drop a condition from the Fields editor
  • Preset are now saved into the config.yaml

Groupby plugin

  • New groupby plugin making possible to group variants

Settings

  • Replace QSettings by a yaml file stored in /home/.config/cutevariant/cutevariant.yaml on Linux

[0.3.3] - 2021-06-02

Added

  • Add Harmonizome plugin [ test ]
  • Improve actions for differents plugins )
  • Refactor internal plugin system
  • Fix bugs

[0.3.2] - 2021-02-03

  • Refactor backend with new VQL to SQL flow
  • Update Filters And Fields editor with new style and features
  • Add new History plugin
  • Add VCF and CSV export features
  • Remove Groupby action from variant view
  • Fixed bugs
  • Hot fix : Samples if VQL filter expression generated wrong query

[0.2.9] - 2021-01-03

Added

Variant View

  • Variant count and variant data are loaded separately in different thread
  • Use a cache system to avoid loading variants 2 times during pagination
  • Option to load links from a browser or from an XHR request . See (settings )
  • Double click on variant to open default link ( see settings )
  • Add Shortcut to mark variant as favorite ( space ) and move into the view ( left, right ... )
  • Add a button to interrupt long query

VQL editor

  • New completer showing fields information

Filter editor

  • Update UI with branching and new buttons
  • Filter can now be stored into a Json file

Variant Info

  • New UI to edit current variant

[0.2.6] - 2020-12-17

Added

  • Now sqlite contains NULL for empty string and float Nan values
  • VQL support IS NULL and IS NOT NULL operation
  • Fields can be ignored from Wizard before importation
  • Variant view support double click with default link action
  • Variant view has a debug button to show sql query and Explain Plan

[0.2.5] - 2020-12-09

Added

  • fix bug with sample fields
  • add history plugin
  • add Trio analysis plugin
  • You must now click on "Apply filter" from the filter plugin
  • Add "IS NULL" in VQL