laminlabs · falexwolf · Sep 29, 2023 · Sep 29, 2023
diff --git a/docs/guide/index.md b/docs/guide/index.md
diff --git a/docs/index.md b/docs/index.md
@@ -3,16 +3,10 @@
 :end-line: 1
 ```
 
-```{note}
-
-If you aren't the person who used the cookiecutter, make sure you init `pre-commit install` and `gitmoji -i` on the CLI before starting to work on this repository!
-```
-
 ```{toctree}
 :maxdepth: 1
 :hidden:
 
-guide/index
-reference
+nextflow
 changelog
 ```
diff --git a/docs/guide/bulk_rna_seq.ipynb → docs/nextflow.ipynb b/docs/guide/bulk_rna_seq.ipynb → docs/nextflow.ipynb
diff --git a/docs/reference.md b/docs/reference.md
diff --git a/lamin-project.yaml b/lamin-project.yaml