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  1. reference_flow reference_flow Public

    Reducing reference bias using multiple population reference genomes

    Python 32 2

  2. vargas vargas Public

    C++ 25 3

  3. FORGe FORGe Public

    Code for building and testing variant ranking strategies

    Python 16 2

  4. monorail-external monorail-external Public

    examples to run monorail externally

    Shell 14 5

  5. dashing-experiments dashing-experiments Public

    Experiments for the Dashing manuscript

    C++ 9

  6. recount-pump recount-pump Public

    HTML 5

Repositories

Showing 10 of 20 repositories
  • monorail-external Public

    examples to run monorail externally

    langmead-lab/monorail-external’s past year of commit activity
    Shell 14 MIT 5 7 0 Updated Nov 14, 2024
  • k2-extra Public
    langmead-lab/k2-extra’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Nov 10, 2024
  • recount-unify Public

    next step after recount-pump in the monorail pipeline

    langmead-lab/recount-unify’s past year of commit activity
    Shell 0 0 0 0 Updated Aug 9, 2024
  • recount-pump Public
    langmead-lab/recount-pump’s past year of commit activity
    HTML 5 0 4 0 Updated Aug 5, 2024
  • bbwt Public
    langmead-lab/bbwt’s past year of commit activity
    C 2 MIT 0 0 0 Updated Jun 13, 2024
  • reference_flow Public

    Reducing reference bias using multiple population reference genomes

    langmead-lab/reference_flow’s past year of commit activity
    Python 32 MIT 2 1 1 Updated May 27, 2024
  • snapcount Public

    R Package for interfacing with Snaptron for rapid querying of expression counts

    langmead-lab/snapcount’s past year of commit activity
    R 3 MIT 1 3 1 Updated Apr 26, 2022
  • recount-clusters Public

    Cluster config files for recount-pump

    langmead-lab/recount-clusters’s past year of commit activity
    Shell 0 0 0 0 Updated Jun 9, 2021
  • recount-projects Public

    Project files for recount projects

    langmead-lab/recount-projects’s past year of commit activity
    Shell 1 0 1 0 Updated Jun 8, 2021
  • vargas Public
    langmead-lab/vargas’s past year of commit activity
    C++ 25 MIT 3 3 2 Updated May 23, 2021
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