diff --git a/docs/_build/doctrees/credits.doctree b/docs/_build/doctrees/credits.doctree index a973b29..878c810 100644 Binary files a/docs/_build/doctrees/credits.doctree and b/docs/_build/doctrees/credits.doctree differ diff --git a/docs/_build/doctrees/environment.pickle b/docs/_build/doctrees/environment.pickle index 35ff3f8..9c30e75 100644 Binary files a/docs/_build/doctrees/environment.pickle and b/docs/_build/doctrees/environment.pickle differ diff --git a/docs/_build/doctrees/references.doctree b/docs/_build/doctrees/references.doctree index 19da758..a3330fd 100644 Binary files a/docs/_build/doctrees/references.doctree and b/docs/_build/doctrees/references.doctree differ diff --git a/docs/_build/html/_sources/credits.rst.txt b/docs/_build/html/_sources/credits.rst.txt index 803a419..a1f419e 100644 --- a/docs/_build/html/_sources/credits.rst.txt +++ b/docs/_build/html/_sources/credits.rst.txt @@ -3,6 +3,8 @@ Credits This package was developed by me, **Laura Fontanesi**, with the help of **Amir Hosein Hadian Rasanan**. It is part of ongoing scientific work at the University of Basel and University of Hamburg, in collaboration with Prof. Jörg Rieskamp and Prof. Sebastian Gluth. -When using this package or part of the code for your own research, I ask you to **cite us** (**INSERT PREPRINT HERE**) and to always perform a parameter recovery, to make sure that everything is working as it should. Even though we tested all functions, I cannot assure that it will work perfectly on all platforms and data formats. Therefore, feedback on usage and issues is especially welcomed at this stage :) +When using this package or part of the code for your own research, I ask you to **cite us (using the doi attached to our `GitHub repository`_)** and to always perform a parameter recovery, to make sure that everything is working as it should. Even though we tested all functions, I cannot assure that it will work perfectly on all platforms and data formats. Therefore, feedback on usage and issues is especially welcomed at this stage :) -If you have any questions or would like to contribute, you can write me at laura.fontanesi@unibas.ch. \ No newline at end of file +If you have any questions or would like to contribute, you can write me at laura.fontanesi@unibas.ch. + +.. _Github repository: https://github.com/laurafontanesi/rlssm \ No newline at end of file diff --git a/docs/_build/html/_sources/references.rst.txt b/docs/_build/html/_sources/references.rst.txt index 91b3aa9..7dc8533 100644 --- a/docs/_build/html/_sources/references.rst.txt +++ b/docs/_build/html/_sources/references.rst.txt @@ -19,7 +19,7 @@ The RLDDMs (combinations of RL and DDM, diffusion decision model) are based on t * Fontanesi, L., Palminteri, S. & Lebreton, M. Cogn Affect Behav Neurosci (2019), `RLDDM paper 2`_ -For a more in-depth explanation of the model's cognitive mechanisms and theories, please refer to **INSERT PREPRINT HERE**. +For a more in-depth explanation of the model's cognitive mechanisms and theories, please refer to https://osf.io/fbpmh/. .. _manual: https://mc-stan.org/docs/2_19/functions-reference/wiener-first-passage-time-distribution.html .. _RDM paper: https://doi.org/10.3758/s13423-020-01719-6 diff --git a/docs/_build/html/credits.html b/docs/_build/html/credits.html index 63f6290..3e59ad8 100644 --- a/docs/_build/html/credits.html +++ b/docs/_build/html/credits.html @@ -204,7 +204,7 @@

Credits

This package was developed by me, Laura Fontanesi, with the help of Amir Hosein Hadian Rasanan. It is part of ongoing scientific work at the University of Basel and University of Hamburg, in collaboration with Prof. Jörg Rieskamp and Prof. Sebastian Gluth.

-

When using this package or part of the code for your own research, I ask you to cite us (INSERT PREPRINT HERE) and to always perform a parameter recovery, to make sure that everything is working as it should. Even though we tested all functions, I cannot assure that it will work perfectly on all platforms and data formats. Therefore, feedback on usage and issues is especially welcomed at this stage :)

+

When using this package or part of the code for your own research, I ask you to cite us (using the doi attached to our `GitHub repository`_) and to always perform a parameter recovery, to make sure that everything is working as it should. Even though we tested all functions, I cannot assure that it will work perfectly on all platforms and data formats. Therefore, feedback on usage and issues is especially welcomed at this stage :)

If you have any questions or would like to contribute, you can write me at laura.fontanesi@unibas.ch.

diff --git a/docs/_build/html/references.html b/docs/_build/html/references.html index aa10ced..1452270 100644 --- a/docs/_build/html/references.html +++ b/docs/_build/html/references.html @@ -216,7 +216,7 @@

ReferencesRLDDM paper 1

  • Fontanesi, L., Palminteri, S. & Lebreton, M. Cogn Affect Behav Neurosci (2019), RLDDM paper 2

  • -

    For a more in-depth explanation of the model’s cognitive mechanisms and theories, please refer to INSERT PREPRINT HERE.

    +

    For a more in-depth explanation of the model’s cognitive mechanisms and theories, please refer to https://osf.io/fbpmh/.

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to rlssm\u2019s documentation","Installation","Model classes","ModelResults class for DDMs (or RLDDMs)","ModelResults class for RL models","ModelResults class for race (or RL+race) models","Fit the DDM on individual data","Fit the DDM on hierarchical data","Parameter recovery of the DDM with starting point bias","Parameter recovery of the hierarchical DDM with starting point bias","Fit the LBA on individual data","Fit the RLDDM on individual data","Fit a RL model on individual data","Fit a RL model on hierarchical data","<no title>","How to fit a model","How to initialize a model","How to inspect model fit results","References","Simulate data with the DDM","Simulate data with RL models, RLDDMs, and RL+race models","Simulate data with race 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to rlssm\u2019s documentation","Installation","Model classes","ModelResults class for DDMs (or RLDDMs)","ModelResults class for RL models","ModelResults class for race (or RL+race) models","Fit the DDM on individual data","Fit the DDM on hierarchical data","Parameter recovery of the DDM with starting point bias","Parameter recovery of the hierarchical DDM with starting point bias","Fit the LBA on individual data","Fit the RLDDM on individual data","Fit a RL model on individual data","Fit a RL model on hierarchical data","<no title>","How to fit a model","How to initialize a model","How to inspect model fit results","References","Simulate data with the DDM","Simulate data with RL models, RLDDMs, and RL+race models","Simulate data with race models"],titleterms:{"class":[3,4,5,6],"import":[7,8,11,12,13,14],RTs:21,alba:6,all:[4,5,6],altern:3,ardm:6,bia:[9,10],calcul:[8,9,10],choic:21,conda:2,credit:0,data:[7,8,9,10,11,12,13,14,16,20,21,22],ddm:[4,7,8,9,10,20],decis:[3,4],depend:2,diagnost:16,diffus:[3,4,6],document:1,environ:2,exampl:16,fit:[7,8,9,10,11,12,13,14,16,18],get:[7,8,9,10,11,12,13,14],group:[7,8,10,11,12,13,14],hierarch:[8,10,14,16],how:[16,17,18],index:1,individu:[7,9,11,12,13],initi:[7,8,9,10,11,12,13,14,17],inspect:18,instal:2,lba:[6,11],learn:[3,4,5,6,16],level:18,load:16,model:[3,4,5,6,7,8,9,10,11,12,13,14,16,17,18,21,22],modelresult:[4,5,6],non:16,numpi:[20,22],onli:21,panda:20,paramet:[9,10],plot:18,point:[9,10],posterior:[7,8,9,10,11,12,13,14,18],predict:[7,8,11,12,13,14,18],previous:16,race:[3,6,21,22],rdm:6,real:16,recoveri:[9,10],refer:19,reinforc:[3,4,5,6],result:[11,16,18],rhat:[7,8,9,10,11,12,13,14],rlalba:6,rlardm:6,rlddm:[4,12,21],rllba:6,rlrdm:[6,21],rlssm:1,save:[11,16],simul:[9,10,16,20,21,22],start:[9,10],stimuli:21,suggest:2,trial:18,ungroup:[7,8,11,12,13,14],waic:[7,8,9,10,11,12,13,14],welcom:1}}) \ No newline at end of file diff --git a/docs/credits.rst b/docs/credits.rst index 803a419..a1f419e 100644 --- a/docs/credits.rst +++ b/docs/credits.rst @@ -3,6 +3,8 @@ Credits This package was developed by me, **Laura Fontanesi**, with the help of **Amir Hosein Hadian Rasanan**. It is part of ongoing scientific work at the University of Basel and University of Hamburg, in collaboration with Prof. Jörg Rieskamp and Prof. Sebastian Gluth. -When using this package or part of the code for your own research, I ask you to **cite us** (**INSERT PREPRINT HERE**) and to always perform a parameter recovery, to make sure that everything is working as it should. Even though we tested all functions, I cannot assure that it will work perfectly on all platforms and data formats. Therefore, feedback on usage and issues is especially welcomed at this stage :) +When using this package or part of the code for your own research, I ask you to **cite us (using the doi attached to our `GitHub repository`_)** and to always perform a parameter recovery, to make sure that everything is working as it should. Even though we tested all functions, I cannot assure that it will work perfectly on all platforms and data formats. Therefore, feedback on usage and issues is especially welcomed at this stage :) -If you have any questions or would like to contribute, you can write me at laura.fontanesi@unibas.ch. \ No newline at end of file +If you have any questions or would like to contribute, you can write me at laura.fontanesi@unibas.ch. + +.. _Github repository: https://github.com/laurafontanesi/rlssm \ No newline at end of file diff --git a/docs/references.rst b/docs/references.rst index 91b3aa9..7dc8533 100644 --- a/docs/references.rst +++ b/docs/references.rst @@ -19,7 +19,7 @@ The RLDDMs (combinations of RL and DDM, diffusion decision model) are based on t * Fontanesi, L., Palminteri, S. & Lebreton, M. Cogn Affect Behav Neurosci (2019), `RLDDM paper 2`_ -For a more in-depth explanation of the model's cognitive mechanisms and theories, please refer to **INSERT PREPRINT HERE**. +For a more in-depth explanation of the model's cognitive mechanisms and theories, please refer to https://osf.io/fbpmh/. .. _manual: https://mc-stan.org/docs/2_19/functions-reference/wiener-first-passage-time-distribution.html .. _RDM paper: https://doi.org/10.3758/s13423-020-01719-6