Applying LN2_LAYERS to other brain measures

[torilynnking]

Hi LayNii experts,

I am using just T1w structural images (3T) and plan to acquire a layer file from LayNii using LN_2LAYERS. After that, I would like to examine another brain measure in each of the layers. What steps should I take to get from LN2_LAYERS output to a usable format to apply to this other brain measure? Is this possible using LayNii with 3T structural images?

Apologies if the questions are confusing. Let me know if I can clarify.

Thank you so much,
Tori

[ofgulban]

Dear @torilynnking ,
Sorry that I have seen your messages just now. I was on holiday.
I might require you to clarify a bit more your question. Have you seen this video (?) : https://youtu.be/7YJPP81NKI4

I think if I understand you correctly, you would like to e.g. plot some other brain measurement (like T2* or T1) as a function of cortical layers. If this is not what you have in mind, maybe you can give a specific example of what you would like to do.

Best wishes,
Faruk