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environment_clean.yaml
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environment_clean.yaml
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name: gdmicro
channels:
- pytorch
- conda-forge
- r
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1
- _openmp_mutex=4.5
- _r-mutex=1.0.1
- binutils_impl_linux-64=2.36.1
- binutils_linux-64=2.36
- bioconductor-biobase=2.46.0
- bioconductor-biocgenerics=0.32.0
- bioconductor-biomformat=1.14.0
- bioconductor-biostrings=2.54.0
- bioconductor-iranges=2.20.0
- bioconductor-multtest=2.42.0
- bioconductor-phyloseq=1.30.0
- bioconductor-rhdf5=2.30.0
- bioconductor-rhdf5lib=1.8.0
- bioconductor-s4vectors=0.24.0
- bioconductor-siamcat=1.6.0
- bioconductor-xvector=0.26.0
- bioconductor-zlibbioc=1.32.0
- blas=1.0
- brotlipy=0.7.0
- bwidget=1.9.14
- bzip2=1.0.8
- ca-certificates=2022.9.24
- cairo=1.16.0
- certifi=2022.9.24
- cffi=1.14.4
- charset-normalizer=2.1.1
- colorama=0.4.5
- conda=4.12.0
- conda-package-handling=1.9.0
- cryptography=38.0.2
- cudatoolkit=10.2.89
- curl=7.68.0
- cycler=0.11.0
- dbus=1.13.6
- decorator=5.1.1
- expat=2.4.9
- ffmpeg=4.3
- fontconfig=2.14.0
- freetype=2.12.1
- fribidi=1.0.10
- gcc_impl_linux-64=7.5.0
- gcc_linux-64=7.5.0
- gettext=0.21.1
- gfortran_impl_linux-64=7.5.0
- gfortran_linux-64=7.5.0
- glib=2.66.3
- gmp=6.2.1
- gnutls=3.6.13
- graphite2=1.3.13
- gsl=2.5
- gst-plugins-base=1.14.5
- gstreamer=1.14.5
- gxx_impl_linux-64=7.5.0
- gxx_linux-64=7.5.0
- harfbuzz=2.4.0
- icu=64.2
- idna=3.4
- intel-openmp=2022.1.0
- jpeg=9e
- kernel-headers_linux-64=2.6.32
- kiwisolver=1.4.4
- krb5=1.16.4
- lame=3.100
- lcms2=2.12
- ld_impl_linux-64=2.36.1
- lerc=4.0.0
- libblas=3.9.0
- libcblas=3.9.0
- libclang=9.0.1
- libcurl=7.68.0
- libdeflate=1.14
- libedit=3.1.20191231
- libffi=3.2.1
- libgcc-ng=12.1.0
- libgfortran-ng=7.5.0
- libgfortran4=7.5.0
- libglib=2.66.3
- libgomp=12.1.0
- libiconv=1.17
- liblapack=3.9.0
- libllvm9=9.0.1
- libopenblas=0.3.12
- libpng=1.6.38
- libsolv=0.7.22
- libsqlite=3.39.4
- libssh2=1.10.0
- libstdcxx-ng=12.1.0
- libtiff=4.4.0
- libuuid=2.32.1
- libwebp-base=1.2.4
- libxcb=1.13
- libxkbcommon=0.10.0
- libxml2=2.9.10
- libzlib=1.2.12
- make=4.3
- matplotlib=3.1.2
- matplotlib-base=3.1.2
- mkl=2022.1.0
- ncurses=6.3
- nettle=3.6
- networkx=2.4
- nspr=4.32
- nss=3.78
- numpy=1.17.3
- openh264=2.1.1
- openjpeg=2.5.0
- openssl=1.1.1q
- pandas=1.0.1
- pandoc=2.19.2
- pango=1.42.4
- pcre=8.45
- pillow=9.2.0
- pip=22.2.2
- pixman=0.38.0
- pthread-stubs=0.4
- pycosat=0.6.3
- pycparser=2.21
- pyopenssl=22.1.0
- pyparsing=3.0.9
- pyqt=5.12.3
- pysocks=1.7.1
- python=3.7.3
- python-dateutil=2.8.2
- python_abi=3.7
- pytorch=1.12.0
- pytorch-mutex=1.0
- pytz=2022.4
- qt=5.12.5
- r-ade4=1.7_16
- r-ape=5.5
- r-askpass=1.1
- r-assertthat=0.2.1
- r-backports=1.2.1
- r-base=3.6.1
- r-base64enc=0.1_3
- r-bbmisc=1.11
- r-beanplot=1.2
- r-blob=1.2.1
- r-brio=1.1.2
- r-broom=0.7.6
- r-callr=3.7.0
- r-cellranger=1.1.0
- r-checkmate=2.0.0
- r-cli=2.5.0
- r-clipr=0.7.1
- r-cluster=2.1.0
- r-codetools=0.2_18
- r-colorspace=2.0_1
- r-corrplot=0.88
- r-cpp11=0.2.7
- r-crayon=1.4.1
- r-curl=4.3.1
- r-data.table=1.14.0
- r-dbi=1.1.1
- r-dbplyr=2.1.1
- r-desc=1.3.0
- r-diffobj=0.3.4
- r-digest=0.6.27
- r-dplyr=1.0.6
- r-ellipsis=0.3.2
- r-evaluate=0.14
- r-fansi=0.4.2
- r-farver=2.1.0
- r-fastmatch=1.1_0
- r-forcats=0.5.1
- r-foreach=1.5.1
- r-fs=1.5.0
- r-generics=0.1.0
- r-ggplot2=3.3.3
- r-glmnet=4.0_2
- r-glue=1.4.2
- r-gridbase=0.4_7
- r-gridextra=2.3
- r-gtable=0.3.0
- r-haven=2.4.1
- r-highr=0.9
- r-hms=1.1.0
- r-htmltools=0.5.1.1
- r-httr=1.4.2
- r-igraph=1.2.6
- r-infotheo=1.2.0
- r-isoband=0.2.4
- r-iterators=1.0.13
- r-jsonlite=1.7.2
- r-knitr=1.33
- r-labeling=0.4.2
- r-lattice=0.20_44
- r-liblinear=2.10_12
- r-lifecycle=1.0.0
- r-lubridate=1.7.10
- r-magrittr=2.0.1
- r-markdown=1.1
- r-mass=7.3_54
- r-matrix=1.3_3
- r-matrixstats=0.58.0
- r-mgcv=1.8_35
- r-mime=0.10
- r-mlr=2.19.0
- r-modelr=0.1.8
- r-munsell=0.5.0
- r-nlme=3.1_150
- r-openssl=1.4.4
- r-parallelmap=1.5.0
- r-paramhelpers=1.14
- r-permute=0.9_5
- r-pillar=1.6.1
- r-pixmap=0.4_12
- r-pkgconfig=2.0.3
- r-pkgload=1.2.1
- r-plyr=1.8.6
- r-praise=1.0.0
- r-prettyunits=1.1.1
- r-proc=1.17.0.1
- r-processx=3.5.2
- r-progress=1.2.2
- r-prroc=1.3.1
- r-ps=1.6.0
- r-purrr=0.3.4
- r-r6=2.5.0
- r-rcolorbrewer=1.1_2
- r-rcpp=1.0.6
- r-readr=1.4.0
- r-readxl=1.3.1
- r-rematch=1.0.1
- r-rematch2=2.1.2
- r-reprex=2.0.0
- r-reshape2=1.4.4
- r-rlang=0.4.11
- r-rmarkdown=2.8
- r-rprojroot=2.0.2
- r-rstudioapi=0.13
- r-rvest=1.0.0
- r-scales=1.1.1
- r-selectr=0.4_2
- r-shape=1.4.6
- r-sp=1.4_5
- r-stringi=1.4.6
- r-stringr=1.4.0
- r-survival=3.2_11
- r-sys=3.4
- r-testthat=3.0.2
- r-tibble=3.1.2
- r-tidyr=1.1.3
- r-tidyselect=1.1.1
- r-tidyverse=1.2.1
- r-tinytex=0.31
- r-utf8=1.2.1
- r-vctrs=0.3.8
- r-vegan=2.5_6
- r-viridislite=0.4.0
- r-waldo=0.2.5
- r-withr=2.4.2
- r-xfun=0.23
- r-xml=3.99_0.3
- r-xml2=1.3.2
- r-yaml=2.2.1
- readline=8.1.2
- requests=2.28.1
- ruamel_yaml=0.15.80
- scipy=1.5.2
- sed=4.8
- setuptools=59.8.0
- six=1.16.0
- sqlite=3.39.4
- sysroot_linux-64=2.12
- tk=8.6.12
- tktable=2.10
- torchaudio=0.12.0
- torchvision=0.13.0
- tornado=6.2
- tqdm=4.64.1
- typing-extensions=4.4.0
- typing_extensions=4.4.0
- urllib3=1.26.11
- wheel=0.37.1
- xorg-kbproto=1.0.7
- xorg-libice=1.0.10
- xorg-libsm=1.2.3
- xorg-libx11=1.7.2
- xorg-libxau=1.0.9
- xorg-libxdmcp=1.1.3
- xorg-libxext=1.3.4
- xorg-libxrender=0.9.10
- xorg-renderproto=0.11.1
- xorg-xextproto=7.3.0
- xorg-xproto=7.0.31
- xz=5.2.6
- yaml=0.2.5
- zlib=1.2.12
- zstd=1.5.2
- pip:
- args==0.1.0
- backcall==0.2.0
- clint==0.5.1
- coverage==6.5.0
- hiddenlayer==0.3
- higra==0.6.4
- ipython==7.32.0
- jedi==0.18.1
- joblib==1.2.0
- mamba==0.11.2
- matplotlib-inline==0.1.6
- parso==0.8.3
- pexpect==4.8.0
- pickleshare==0.7.5
- prompt-toolkit==3.0.31
- ptyprocess==0.7.0
- pygments==2.13.0
- pyqt5-sip==4.19.18
- pyqtchart==5.12
- pyqtwebengine==5.12.1
- scikit-learn==1.0.2
- threadpoolctl==3.1.0
- traitlets==5.4.0
- wcwidth==0.2.5