diff --git a/linc_convert/modalities/psoct/multi_slice.py b/linc_convert/modalities/psoct/multi_slice.py index 03ec4e7..6de2803 100644 --- a/linc_convert/modalities/psoct/multi_slice.py +++ b/linc_convert/modalities/psoct/multi_slice.py @@ -183,8 +183,12 @@ def convert( """ Matlab to OME-Zarr. - Convert OCT volumes in raw matlab files - into a pyramidal OME-ZARR (or NIfTI-Zarr) hierarchy. + Convert OCT volumes in raw matlab files into a pyramidal + OME-ZARR (or NIfTI-Zarr) hierarchy. + + This command assumes that each slice in a volume is stored in a + different mat file. All slices must have the same shape, and will + be concatenated into a 3D Zarr. Parameters ---------- @@ -207,7 +211,7 @@ def convert( max_levels Maximum number of pyramid levels no_pool - Index of dimension to not pool when building pyramid + Index of dimension to not pool when building pyramid. nii Convert to nifti-zarr. True if path ends in ".nii.zarr" orientation