Partial installation experience, using (suggested?) mixed pip/poetry environment

[turbomam]

This project uses poetry, but the initial setup instructions suggest using pip to install linkml

Advantages? Disadvantages?

[turbomam]

Also: installation instructions say to install poetry, but that's not present in the example. Maybe that's because the installation method is dependent on the user's platform?

[turbomam]

See also #7

On my LBL MacBook Pro (intel)

I already have poetry installed

poetry --version

Poetry version 1.1.10

• cd ~/Documents/gitrepos
  • That wouldn't be the same for other users. I guess that's my analogue to ~/my-projects ?

Install linkml (and all of its dependencies) into global environment with pip?!

• pip install linkml
• pip list | wc -l

84

I wouldn't normally want to do that

• linkml-ws

ModuleNotFoundError: No module named 'six'

continued in #8

[turbomam]

linkml-ws does run on my Ubuntu Linux computer, but I'm surprised by the help message.

See #9

[turbomam]

after running linkml-ws

make setup

./utils/get-value.sh: 4: Bad substitution
./utils/get-value.sh: 4: Bad substitution

Continued in #10

I think the remaining steps ran OK.

I'm confused by my git status, or what I should do next to get this "into my GH account". See #11