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collect_eval_bdry.m
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collect_eval_bdry.m
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function [ bestF, bestP, bestR, bestT, F_max, P_max, R_max, Area_PR] = collect_eval_bdry(pbDir)
%
% calculate P, R and F-measure from individual evaluation files
%
% Pablo Arbelaez <[email protected]>
fname = fullfile(pbDir, 'eval_bdry.txt');
if (length(dir(fname))==1),
tmp = dlmread(fname);
bestT = tmp(1);
bestR = tmp(2);
bestP = tmp(3);
bestF = tmp(4);
R_max = tmp(5);
P_max = tmp(6);
F_max = tmp(7);
Area_PR = tmp(8);
else
S = dir(fullfile(pbDir,'*_eval_*.txt'));
% deduce nthresh from .pr files
filename = fullfile(pbDir,S(1).name);
AA = dlmread(filename); % thresh cntR sumR cntP sumP
thresh = AA(:,1);
nthresh = numel(thresh);
cntR_total = zeros(nthresh,1);
sumR_total = zeros(nthresh,1);
cntP_total = zeros(nthresh,1);
sumP_total = zeros(nthresh,1);
cntR_max = 0;
sumR_max = 0;
cntP_max = 0;
sumP_max = 0;
scores = zeros(length(S),5);
for i = 1:length(S),
iid = S(i).name(1:end-8);
fprintf(2,'Processing image %s (%d/%d)...\n',iid,i,length(S));
filename = fullfile(pbDir,S(i).name);
AA = dlmread(filename);
cntR = AA(:, 2);
sumR = AA(:, 3);
cntP = AA(:, 4);
sumP = AA(:, 5);
R = cntR ./ (sumR + (sumR==0));
P = cntP ./ (sumP + (sumP==0));
F = fmeasure(R,P);
[bestT,bestR,bestP,bestF] = maxF(thresh,R,P);
scores(i,:) = [i bestT bestR bestP bestF];
cntR_total = cntR_total + cntR;
sumR_total = sumR_total + sumR;
cntP_total = cntP_total + cntP;
sumP_total = sumP_total + sumP;
ff=find(F==max(F));
cntR_max = cntR_max + cntR(ff(1));
sumR_max = sumR_max + sumR(ff(1));
cntP_max = cntP_max + cntP(ff(1));
sumP_max = sumP_max + sumP(ff(1));
end
R = cntR_total ./ (sumR_total + (sumR_total==0));
P = cntP_total ./ (sumP_total + (sumP_total==0));
F = fmeasure(R,P);
[bestT,bestR,bestP,bestF] = maxF(thresh,R,P);
fname = fullfile(pbDir,'eval_bdry_img.txt');
fid = fopen(fname,'w');
if fid==-1,
error('Could not open file %s for writing.',fname);
end
fprintf(fid,'%10d %10g %10g %10g %10g\n',scores');
fclose(fid);
fname = fullfile(pbDir,'eval_bdry_thr.txt');
fid = fopen(fname,'w');
if fid==-1,
error('Could not open file %s for writing.',fname);
end
fprintf(fid,'%10g %10g %10g %10g\n',[thresh R P F]');
fclose(fid);
R_max = cntR_max ./ (sumR_max + (sumR_max==0));
P_max = cntP_max ./ (sumP_max + (sumP_max==0));
F_max = fmeasure(R_max,P_max);
[Ru, indR] = unique(R);
Pu = P(indR);
Ri = 0 : 0.01 : 1;
if numel(Ru)>1,
P_int1 = interp1(Ru, Pu, Ri);
P_int1(isnan(P_int1)) = 0;
Area_PR = sum(P_int1)*0.01;
else
Area_PR = 0;
end
fname = fullfile(pbDir,'eval_bdry.txt');
fid = fopen(fname,'w');
if fid==-1,
error('Could not open file %s for writing.',fname);
end
fprintf(fid,'%10g %10g %10g %10g %10g %10g %10g %10g\n',bestT,bestR,bestP,bestF,R_max,P_max,F_max,Area_PR);
fclose(fid);
end
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% compute f-measure fromm recall and precision
function [f] = fmeasure(r,p)
f = 2*p.*r./(p+r+((p+r)==0));
% interpolate to find best F and coordinates thereof
function [bestT,bestR,bestP,bestF] = maxF(thresh,R,P)
bestT = thresh(1);
bestR = R(1);
bestP = P(1);
bestF = fmeasure(R(1),P(1));
for i = 2:numel(thresh),
for d = linspace(0,1),
t = thresh(i)*d + thresh(i-1)*(1-d);
r = R(i)*d + R(i-1)*(1-d);
p = P(i)*d + P(i-1)*(1-d);
f = fmeasure(r,p);
if f > bestF,
bestT = t;
bestR = r;
bestP = p;
bestF = f;
end
end
end