diff --git a/ena-submission/scripts/create_assembly.py b/ena-submission/scripts/create_assembly.py index f42773d86..dc8ea5061 100644 --- a/ena-submission/scripts/create_assembly.py +++ b/ena-submission/scripts/create_assembly.py @@ -135,7 +135,7 @@ def create_manifest_object( metadata = submission_table_entry["metadata"] unaligned_nucleotide_sequences = submission_table_entry["unaligned_nucleotide_sequences"] - organism_metadata = config.organisms[group_key["organism"]]["ingest"] + organism_metadata = config.organisms[group_key["organism"]]["enaDeposition"] chromosome_list_object = create_chromosome_list_object(unaligned_nucleotide_sequences, seq_key) chromosome_list_file = create_chromosome_list(list_object=chromosome_list_object, dir=dir) authors = ( diff --git a/ena-submission/scripts/ena_types.py b/ena-submission/scripts/ena_types.py index 2742d97c4..f41a6a376 100644 --- a/ena-submission/scripts/ena_types.py +++ b/ena-submission/scripts/ena_types.py @@ -188,8 +188,8 @@ class AssemblyManifest: moleculetype: MoleculeType | None = None description: str | None = None run_ref: list[str] | None = None - address: str | None - authors: str | None + address: str | None = None + authors: str | None = None class ChromosomeType(Enum):