diff --git a/python/lsst/daf/butler/_butler.py b/python/lsst/daf/butler/_butler.py
index 122ecee3a5..5726d78a07 100644
--- a/python/lsst/daf/butler/_butler.py
+++ b/python/lsst/daf/butler/_butler.py
@@ -1109,6 +1109,7 @@ def _findDatasetRef(
 
         return ref
 
+    # TODO: remove on DM-40067.
     @transactional
     @deprecated(
         reason="Butler.put() now behaves like Butler.putDirect() when given a DatasetRef."
@@ -1204,6 +1205,7 @@ def put(
 
         return ref
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.get() now behaves like Butler.getDirect() when given a DatasetRef."
         " Please use Butler.get(). Will be removed after v26.0.",
@@ -1240,6 +1242,7 @@ def getDirect(
         """
         return self._datastore.get(ref, parameters=parameters, storageClass=storageClass)
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.getDeferred() now behaves like getDirectDeferred() when given a DatasetRef. "
         "Please use Butler.getDeferred(). Will be removed after v26.0.",
@@ -1739,6 +1742,7 @@ def _exists_many(
 
         return existence
 
+    # TODO: remove on DM-40079.
     @deprecated(
         reason="Butler.datasetExists() has been replaced by Butler.exists(). Will be removed after v26.0.",
         version="v26.0",
diff --git a/python/lsst/daf/butler/_limited_butler.py b/python/lsst/daf/butler/_limited_butler.py
index 12697d777f..f04d92221f 100644
--- a/python/lsst/daf/butler/_limited_butler.py
+++ b/python/lsst/daf/butler/_limited_butler.py
@@ -55,6 +55,7 @@ def isWriteable(self) -> bool:
         """Return `True` if this `Butler` supports write operations."""
         raise NotImplementedError()
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.put() now behaves like Butler.putDirect() when given a DatasetRef."
         " Please use Butler.put(). Will be removed after v26.0.",
@@ -164,6 +165,7 @@ def get(
         log.debug("Butler get: %s, parameters=%s, storageClass: %s", ref, parameters, storageClass)
         return self._datastore.get(ref, parameters=parameters, storageClass=storageClass)
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.get() now behaves like Butler.getDirect() when given a DatasetRef."
         " Please use Butler.get(). Will be removed after v26.0.",
@@ -200,6 +202,7 @@ def getDirect(
         """
         return self._datastore.get(ref, parameters=parameters, storageClass=storageClass)
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.getDeferred() now behaves like getDirectDeferred() when given a DatasetRef. "
         "Please use Butler.getDeferred(). Will be removed after v26.0.",
@@ -443,6 +446,7 @@ def stored_many(
         """
         return self._datastore.mexists(refs)
 
+    # TODO: remove on DM-40079.
     @deprecated(
         reason="Butler.datasetExistsDirect() has been replaced by Butler.stored(). "
         "Will be removed after v26.0.",
@@ -542,6 +546,7 @@ def dimensions(self) -> DimensionUniverse:
         """
         raise NotImplementedError()
 
+    # TODO: remove on DM-40080.
     @property
     @deprecated(
         reason="The Butler.datastore property is now deprecated. Butler APIs should now exist with the "
diff --git a/python/lsst/daf/butler/_quantum_backed.py b/python/lsst/daf/butler/_quantum_backed.py
index 9f54f5cc56..dbdb331ebe 100644
--- a/python/lsst/daf/butler/_quantum_backed.py
+++ b/python/lsst/daf/butler/_quantum_backed.py
@@ -379,6 +379,7 @@ def isWriteable(self) -> bool:
         # Docstring inherited.
         return True
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.get() now behaves like Butler.getDirect() when given a DatasetRef."
         " Please use Butler.get(). Will be removed after v26.0.",
@@ -418,6 +419,7 @@ def get(
             self._available_inputs.add(ref.id)
         return obj
 
+    # TODO: remove on DM-40067.
     @deprecated(
         reason="Butler.getDeferred() now behaves like getDirectDeferred() when given a DatasetRef. "
         "Please use Butler.getDeferred(). Will be removed after v26.0.",
diff --git a/python/lsst/daf/butler/core/quantum.py b/python/lsst/daf/butler/core/quantum.py
index 795084cacf..ae323e72f5 100644
--- a/python/lsst/daf/butler/core/quantum.py
+++ b/python/lsst/daf/butler/core/quantum.py
@@ -392,10 +392,12 @@ def from_simple(
             required dimension has already been loaded. Otherwise the record
             will be unpersisted from the SerializedQuatnum and added to the
             reconstitutedDimensions dict (if not None). Defaults to None.
-            Deprecated, any argument will be ignored.
+            Deprecated, any argument will be ignored.  Will be removed after
+            v26.
         """
         initInputs: MutableMapping[DatasetType, DatasetRef] = {}
         if reconstitutedDimensions is not None:
+            # TODO: remove this argument on DM-40150.
             warnings.warn(
                 "The reconstitutedDimensions argument is now ignored and may be removed after v26",
                 category=FutureWarning,
diff --git a/python/lsst/daf/butler/instrument.py b/python/lsst/daf/butler/instrument.py
index 4a6b27d726..9c84b2b7fb 100644
--- a/python/lsst/daf/butler/instrument.py
+++ b/python/lsst/daf/butler/instrument.py
@@ -27,6 +27,7 @@
 from lsst.daf.butler import DataCoordinate, DimensionGraph, DimensionPacker
 
 
+# TODO: remove on DM-38687.
 @deprecated(
     "Deprecated in favor of configurable dimension packers.  Will be removed after v26.",
     version="v26",