Nextflow workshop 2018 Programme


8.30 - 9.00	Registration
9.00 - 9.10	Welcome (Damjana Kastelic, CRG Training)
9.10 - 11.00	Nextflow for beginners (1)
11.00 - 11.30	Coffee break
11.30 - 13.00	Nextflow for beginners (2)
13.00 - 14.15	Lunch
14.15 - 14.50	Paolo Di Tommaso: The state of Nextflow [deck]
14.50 - 15.20	Luke Goodsell: Industrial Personalised Immunotherapy Pipeline Development with Nextflow [deck]
15.20 - 15.50	Philip Ewels: NF-Core, A community effort to collect curated Nextflow pipelines [deck]
15.50 - 16.00	Alessia Visconti: Nextflow on the go [deck]
16.00 - 16.10	Julia Soellner: Exploiting orthology and de novo transcriptome assembly to refine target sequence information [deck]
16.10 - 16.20	Tiffany Delhomme: IARC nextflow pipelines: towards efficient cancer genomics analyses [deck]
16.20 - 16.30	Diogo Nuno Silva: FlowCraft, A modular, extensible and flexible tool to build, monitor and report nextflow pipelines [deck]
16.30 - 17.00	Coffee break
17.00 - open	Hackathon
20.00 - open	Social dinner


9.30 - 10.00	Vladimir Kiselev: Nextflow at the heart of UK genomics [slides]
10.00 - 10.30	Simone Coughlan: Using Nextflow to create scalable and reproducible pipelines at Genomics Medicine Ireland [deck]
10.30 - 10.40	Roger Olivella: QCloud, A web-based quality control system for mass spectrometry-based proteomics laboratories [deck]
10.40 - 10.50	Francesco Strozzi: Agile pipelines with Nextflow: how to go from development to production without pain [deck]
10.50 - 11.00	Evan Floden: Nextflow support and enhancements [deck]
11.00 - 11.30	Coffee break
11.30 - 13.00	Hackathon
13.00 - 14.00	Lunch
14.00 - 14.10	Antonio Puertas Gallardo: Supporting the European Reference Laboratory for GMO Food and Feed [deck]
14.10 - 14.40	Luca Carrogu: Scaling genomics in the AWS cloud [deck]
14.40 - 18.00	Hackathon
18.00 - 18.30	Final remarks & Farewell
18.30 - open	Visit of the Brewery

Registration

For details and registration check this link.