DiscoverY killed

[astridboehne]

Hi, I am trying to run DiscoverY,
I followed the manual and run it in this way
python discoverY.py --female_bloom --mode female+male
with the data like this
ls data/
female.fasta female_kmers kmers_from_male_reads male_contigs.fasta
I get the following information from the program:
Started DiscoverY
Mode female+male
Using default of k=25 and input folder='data'
Shortlisting Y-contigs
Opening Bloom Filter of k-mers from female
Done
Generating a dictionary from kmers in kmers_from_male_reads
Killed
The female.bloom file gets created and also an empty file called proportion_annotated_contigs.fasta in the directory above the data directory
I was suspecting a memory issue but it does not seem to be the case. I am running on a Unix cluster using a virtual environment
Any help would be great
Thanks
Astrid