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TODO.md

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TODO

  • Add known locus pages.

  • Add signals to known locus pages.

  • Add genes to known locus pages.

  • Add section for known loci to signal pages.

  • Add column for known loci to signals tables everywhere.

  • Add section for known loci to gene pages.

  • Add more known locus pages (Cyp9k1, Tep1, ...)

  • Add evidence for known locus pages.

  • Change percentile to be computed as percentile over all raw values not windowed values.

  • Try polarising IHS by major allele

  • Scatter plots of max percentile versus peak model fit for all signals page, population pages, seqid pages, statistic pages

  • Pages and plots to browse the windowed statistics over the genome

  • Check gene pages, e.g., Vgsc, why no signals?

  • Fix asterisc in hover label for population comparison

  • Review XPEHH results, can we remove any of the comparisons?

  • Investigate IHS, any way to tighten up the signals?

  • Build XPEHH signals for Guinea-Bissau