diff --git a/malariagen_data/util.py b/malariagen_data/util.py index 0094cdd89..9638bb401 100644 --- a/malariagen_data/util.py +++ b/malariagen_data/util.py @@ -29,7 +29,7 @@ import zarr from fsspec.core import url_to_fs from fsspec.mapping import FSMap -from numpydoc_decorator.impl import format_type +from numpydoc_decorator.impl import humanize_type from typing_extensions import TypeAlias, get_type_hints DIM_VARIANT = "variants" @@ -915,8 +915,8 @@ def wrapper(*args, **kwargs): try: typeguard.check_type(v, t) except typeguard.TypeCheckError as e: - expected_type = format_type(t) - actual_type = format_type(type(v)) + expected_type = humanize_type(t) + actual_type = humanize_type(type(v)) message = fill( dedent( f""" diff --git a/poetry.lock b/poetry.lock index 294b41717..010cd64e2 100644 --- a/poetry.lock +++ b/poetry.lock @@ -857,63 +857,63 @@ test-no-images = ["pytest"] [[package]] name = "coverage" -version = "7.2.5" +version = "7.2.6" description = "Code coverage measurement for 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name = "typing-extensions" -version = "4.5.0" +version = "4.6.2" description = "Backported and Experimental Type Hints for Python 3.7+" category = "main" optional = false python-versions = ">=3.7" files = [ - {file = "typing_extensions-4.5.0-py3-none-any.whl", hash = "sha256:fb33085c39dd998ac16d1431ebc293a8b3eedd00fd4a32de0ff79002c19511b4"}, - {file = "typing_extensions-4.5.0.tar.gz", hash = "sha256:5cb5f4a79139d699607b3ef622a1dedafa84e115ab0024e0d9c044a9479ca7cb"}, + {file = "typing_extensions-4.6.2-py3-none-any.whl", hash = "sha256:3a8b36f13dd5fdc5d1b16fe317f5668545de77fa0b8e02006381fd49d731ab98"}, + {file = "typing_extensions-4.6.2.tar.gz", hash = "sha256:06006244c70ac8ee83fa8282cb188f697b8db25bc8b4df07be1873c43897060c"}, ] [[package]] @@ -4359,14 +4372,14 @@ dev = ["flake8 (<4.0.0)", "flake8-annotations", "flake8-bugbear", "flake8-commas [[package]] name = "urllib3" -version = "1.26.15" +version = "1.26.16" description = "HTTP library with thread-safe connection pooling, file post, and more." category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" files = [ - {file = "urllib3-1.26.15-py2.py3-none-any.whl", hash = "sha256:aa751d169e23c7479ce47a0cb0da579e3ede798f994f5816a74e4f4500dcea42"}, - {file = "urllib3-1.26.15.tar.gz", hash = "sha256:8a388717b9476f934a21484e8c8e61875ab60644d29b9b39e11e4b9dc1c6b305"}, + {file = "urllib3-1.26.16-py2.py3-none-any.whl", hash = "sha256:8d36afa7616d8ab714608411b4a3b13e58f463aee519024578e062e141dce20f"}, + {file = "urllib3-1.26.16.tar.gz", hash = "sha256:8f135f6502756bde6b2a9b28989df5fbe87c9970cecaa69041edcce7f0589b14"}, ] [package.extras] @@ -4437,14 +4450,14 @@ files = [ [[package]] name = "websocket-client" -version = "1.5.1" +version = "1.5.2" description = "WebSocket client for Python with low level API options" category = "dev" optional = false python-versions = ">=3.7" files = [ - {file = "websocket-client-1.5.1.tar.gz", hash = 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protopunica = "*"