From 8b135f6d40087e0d92ff5a20ef7344f1eaf6207e Mon Sep 17 00:00:00 2001 From: Damon Pham Date: Sun, 15 May 2022 12:05:40 -0400 Subject: [PATCH 1/3] Update cran-comments.md --- cran-comments.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/cran-comments.md b/cran-comments.md index 5e424b1a..0ae0b018 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -17,7 +17,8 @@ These files are necessary and have already been reduced in size. ## Downstream dependencies -There is one downstream dependency, `fMRIscrub`. It continues to pass all checks. +No downstream dependencies on CRAN. + ## Tests Passes all the tests in `tests/run_ciftiTools_tests.R` \ No newline at end of file From 893ae99d78ad84b208a7567e7957a4d2a8be60ae Mon Sep 17 00:00:00 2001 From: Damon Pham Date: Sun, 15 May 2022 12:06:25 -0400 Subject: [PATCH 2/3] submit to CRAN. --- .Rbuildignore | 1 + CRAN-SUBMISSION | 3 +++ 2 files changed, 4 insertions(+) create mode 100644 CRAN-SUBMISSION diff --git a/.Rbuildignore b/.Rbuildignore index ff173e11..0eb072d4 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -19,3 +19,4 @@ ^README_media$ ^tests/run_ciftiTools_tests\.R$ ^codecov\.yml$ +^CRAN-SUBMISSION$ diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION new file mode 100644 index 00000000..52942f69 --- /dev/null +++ b/CRAN-SUBMISSION @@ -0,0 +1,3 @@ +Version: 0.9.0 +Date: 2022-05-15 16:06:17 UTC +SHA: 8b135f6d40087e0d92ff5a20ef7344f1eaf6207e From 80eeaff5dc6b3ecafa1fb1b86d3f9ccb9deaf256 Mon Sep 17 00:00:00 2001 From: Damon Pham Date: Mon, 16 May 2022 09:57:24 -0400 Subject: [PATCH 3/3] Complete CRAN submission. --- CRAN-SUBMISSION | 3 --- NEWS.md | 27 +++++++++++++++------------ 2 files changed, 15 insertions(+), 15 deletions(-) delete mode 100644 CRAN-SUBMISSION diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION deleted file mode 100644 index 52942f69..00000000 --- a/CRAN-SUBMISSION +++ /dev/null @@ -1,3 +0,0 @@ -Version: 0.9.0 -Date: 2022-05-15 16:06:17 UTC -SHA: 8b135f6d40087e0d92ff5a20ef7344f1eaf6207e diff --git a/NEWS.md b/NEWS.md index 1709637e..fce976b4 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,14 +1,17 @@ -# 9.0 (TBD) - -* Replace coveralls with codecov -* Add `convention` and `orientation_labels` to `view_xifti_volume` (default: neurological, instead of radiological) -* Add `together_ncol` to `view_xifti_*` -* Add citation to welcome message -* Better file path management for system commands -* Allow `"xifti"` objects to have different resolutions in the left and right cortex -* Better use of S3 group methods for Math, Ops, Summary functions -* Add `fname` to `view_comp` -* Misc. patches +# 9.0 (May 16, 2022) + +New features +Add convention and orientation_labels to view_xifti_volume (default: neurological, instead of radiological as it's been previously) +Add together_ncol to view_xifti_* to control compositing layout +Add fname argument to view_comp to save the result to a PNG file +Allow "xifti" objects to have different resolutions in the left and right cortex +Add citation to welcome message + +Behind-the-scenes improvements +Better file path management for system commands +Better use of S3 group methods for Math, Ops, Summary functions +Replace coveralls with codecov +Misc. patches # 8.0 (February 1, 2022) @@ -373,4 +376,4 @@ Other updates: * Rewrote `resample_cifti()`. The new version calls `separate_cifti()`, `resample_cifti_components()`, and then uses a template to create the new CIFTI file. (The first half is nearly identical to `read_separate_cifti()`.) * Moved common argument/parameter descriptions to `rox_args_docs.R`. Use `@inheritParams` to reference these descriptions. This should make maintaining them across the entire package easier. * Wrapper functions `separate_cifti_wrapper()` and `resample_cifti_wrapper()` to avoid duplicate code across `read_cifti()` and `resample_cifti()`. These should not be used by end-users, so they are not exported. -* Split utility functions into `utils.R` for general functions and `utils_cifti.R` for CIFTI-specific functions. \ No newline at end of file +* Split utility functions into `utils.R` for general functions and `utils_cifti.R` for CIFTI-specific functions.