manual-references.yaml

---
- publisher: Wiley
  issue: '1'
  DOI: 10.1002/leap.1215
  type: article-journal
  page: 75-78
  source: Crossref
  title: Can we transform scholarly communication with open source and community-owned
    infrastructure?
  volume: '32'
  author:
  - given: Alison
    family: McGonagle-O’Connell
  - given: Kristen
    family: Ratan
  container-title: Learned Publishing
  language: en
  issued:
    date-parts:
    - - 2019
      - 1
  URL: https://doi.org/gf6zzh
  container-title-short: Learned Publishing
  id: 6rFhYdpo
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1002/leap.1215
- publisher: Elsevier BV
  DOI: 10.1016/j.websem.2012.08.001
  type: article-journal
  page: 33-43
  source: Crossref
  title: 'FaBiO and CiTO: Ontologies for describing bibliographic resources and citations'
  volume: '17'
  author:
  - given: Silvio
    family: Peroni
  - given: David
    family: Shotton
  container-title: Journal of Web Semantics
  language: en
  issued:
    date-parts:
    - - 2012
      - 12
  URL: https://doi.org/gf2tnn
  container-title-short: Journal of Web Semantics
  id: UXqEXKOT
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1016/j.websem.2012.08.001
- publisher: Cambridge University Press (CUP)
  issue: '2'
  abstract: "<jats:title>ABSTRACT</jats:title><jats:p>The recent censorship requests
    made by Chinese authorities to Western academic publishers have sent shockwaves
    throughout the academic world. This article examines the high-profile <jats:italic>The
    China Quarterly</jats:italic> incident as a case in point. Because the censorship
    is expected to be followed by similar demands to other publications, it is important
    for the academic community to explore the logic behind it. This research article
    provides a preliminary analysis of publications on the censorship list and compares
    them to uncensored articles on similar themes. This exercise allows us to draw
    important insights. Theoretically, this article makes an original contribution
    by going beyond the censorship within to outside China. Empirically, it offers
    a comprehensive analysis of what China wants to censor and the context for its
    actions.</jats:p>"
  DOI: 10.1017/s1049096518002093
  type: article-journal
  page: 287-292
  source: Crossref
  title: 'Academic Censorship in China: The Case of The China Quarterly'
  volume: '52'
  author:
  - given: Mathew Y. H.
    family: Wong
  - given: Ying-ho
    family: Kwong
  container-title: 'PS: Political Science & Politics'
  language: en
  issued:
    date-parts:
    - - 2019
      - 1
      - 7
  URL: https://doi.org/gf9r2m
  container-title-short: APSC
  id: 19JOFNsW
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1017/s1049096518002093
- publisher: Springer Science and Business Media LLC
  issue: '7589'
  DOI: 10.1038/530148a
  type: article-journal
  page: 148-151
  source: Crossref
  title: Does it take too long to publish research?
  volume: '530'
  author:
  - given: Kendall
    family: Powell
  container-title: Nature
  language: en
  issued:
    date-parts:
    - - 2016
      - 2
  URL: https://doi.org/f3mn4t
  container-title-short: Nature
  PMID: '26863966'
  id: PZA0cOT1
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1038/530148a
- publisher: Springer Science and Business Media LLC
  issue: '7776'
  DOI: 10.1038/d41586-019-02795-y
  type: article-journal
  page: 13-14
  source: Crossref
  title: How US sanctions are crippling science in Iran
  volume: '574'
  author:
  - given: Declan
    family: Butler
  container-title: Nature
  language: en
  issued:
    date-parts:
    - - 2019
      - 9
      - 24
  URL: https://doi.org/gf9r2n
  container-title-short: Nature
  PMID: '31576034'
  id: cWKgmoXZ
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1038/d41586-019-02795-y
- publisher: Informa UK Limited
  issue: '3'
  DOI: 10.1080/1047840x.2012.692215
  type: article-journal
  page: 217-243
  source: Crossref
  title: 'Scientific Utopia: I. Opening Scientific Communication'
  volume: '23'
  author:
  - given: Brian A.
    family: Nosek
  - given: Yoav
    family: Bar-Anan
  container-title: Psychological Inquiry
  language: en
  issued:
    date-parts:
    - - 2012
      - 7
  URL: https://doi.org/gcsk27
  container-title-short: Psychological Inquiry
  id: 9vdtIXfz
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1080/1047840x.2012.692215
- publisher: American Association for the Advancement of Science (AAAS)
  DOI: 10.1126/science.aay2091
  type: article-journal
  source: Crossref
  title: 'Update: In reversal, science publisher IEEE drops ban on using Huawei scientists
    as reviewers'
  author:
  - given: Jeffrey
    family: Mervis
  container-title: Science
  issued:
    date-parts:
    - - 2019
      - 6
      - 3
  URL: https://doi.org/gf9r2p
  container-title-short: Science
  id: dzUWx591
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1126/science.aay2091
- publisher: Public Library of Science (PLoS)
  issue: '2'
  DOI: 10.1371/journal.pcbi.1005962
  type: article-journal
  page: e1005962
  source: Crossref
  title: A comprehensive and quantitative comparison of text-mining in 15 million
    full-text articles versus their corresponding abstracts
  volume: '14'
  author:
  - given: David
    family: Westergaard
  - given: Hans-Henrik
    family: Stærfeldt
  - given: Christian
    family: Tønsberg
  - given: Lars Juhl
    family: Jensen
  - given: Søren
    family: Brunak
  container-title: PLOS Computational Biology
  language: en
  editor:
  - given: Andrey
    family: Rzhetsky
  issued:
    date-parts:
    - - 2018
      - 2
      - 15
  URL: https://doi.org/gcx747
  container-title-short: PLoS Comput Biol
  PMCID: PMC5831415
  PMID: '29447159'
  id: DGlWGDEt
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1371/journal.pcbi.1005962
- publisher: Public Library of Science (PLoS)
  issue: '9'
  DOI: 10.1371/journal.pone.0223116
  type: article-journal
  page: e0223116
  source: Crossref
  title: 'Scientific sinkhole: The pernicious price of formatting'
  volume: '14'
  author:
  - given: Allana G.
    family: LeBlanc
  - given: Joel D.
    family: Barnes
  - given: Travis J.
    family: Saunders
  - given: Mark S.
    family: Tremblay
  - given: Jean-Philippe
    family: Chaput
  container-title: PLOS ONE
  language: en
  editor:
  - given: Alireza
    family: Abbasi
  issued:
    date-parts:
    - - 2019
      - 9
      - 26
  URL: https://doi.org/gf84h5
  container-title-short: PLoS ONE
  PMCID: PMC6763211
  PMID: '31557272'
  id: ISRH1Pz2
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1371/journal.pone.0223116
- publisher: Princeton University Press
  DOI: 10.1515/9781400839452
  source: Crossref
  title: Reinventing Discovery
  author:
  - given: Michael
    family: Nielsen
  issued:
    date-parts:
    - - 2011
      - 10
      - 3
  URL: https://doi.org/gfx2dm
  id: 1DiVJ3t6P
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.1515/9781400839452
  type: entry
- publisher: Ligue des Bibliotheques Europeennes de Recherche
  issue: '1'
  abstract: "<jats:p>Open access publishing has frequently been proposed as a solution
    to the serials crisis, which involved unsustainable budgetary pressures on libraries
    due to hyperinflation of subscription costs. The majority of open access articles
    are published in a minority of journals that levy article processing charges (APCs)
    paid by authors or their institutions upon acceptance. Increases in APCs is proceeding
    at a rate three times that which would be expected if APCs were indexed according
    to inflation. As increasingly ambitious funder mandates are proposed, such as
    Plan S, it is important to evaluate whether authors show signs of price sensitivity
    in journal selection by avoiding journals that introduce or increase their APCs.
    Examining journals that introduced an APC 4-5 years after launch or when flipping
    from a subscription model to immediate open access model showed no evidence that
    APC introduction reduced article volumes. Multilevel modelling of APC sensitivity
    across 319 journals published by the four largest APC-funded dedicated commercial
    open access publishers (BMC, Frontiers, MDPI, and Hindawi) revealed that from
    2012 to 2018 higher APCs were actually associated with increased article volumes.
    These findings indicate that APC hyperinflation is not suppressed through market
    competition and author choice. Instead, demand for scholarly journal publications
    may be more similar to demand for necessities, or even prestige goods, which will
    support APC hyperinflation to the detriment of researchers, institutions, and
    funders.</jats:p>"
  DOI: 10.18352/lq.10280
  type: article-journal
  page: 1-18
  source: Crossref
  title: 'Article Processing Charge Hyperinflation and Price Insensitivity: An Open
    Access Sequel to the Serials Crisis'
  volume: '29'
  author:
  - given: Shaun Yon-Seng
    family: Khoo
  container-title: 'LIBER Quarterly: The Journal of the Association of European Research
    Libraries'
  issued:
    date-parts:
    - - 2019
      - 5
      - 9
  URL: https://doi.org/c6pc
  container-title-short: LIBER
  id: SktICFA9
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.18352/lq.10280
- publisher: Center for Open Science
  abstract: "<p>An enormous wealth of digital tools now exists for collaborating on
    scholarly research projects. In particular, it is now possible to collaboratively
    author research articles in an openly participatory and dynamic format. Here we
    describe and provide recommendations for a more open process of collaboration,
    and discuss the potential issues and pitfalls that come with managing large and
    diverse authoring communities. We summarize our personal experiences in a form
    of ‘ten simple rules’. Typically, these collaborative, online projects lead to
    the production of what we here identify as Massively Open Online Papers (MOOPs).
    We consider a MOOP to be distinct from a ‘traditional’ collaborative article in
    that it is defined by an openly participatory process, not bound within the constraints
    of a predefined contributors list. This is a method of organised creativity designed
    for the efficient generation and capture of ideas in order to produce new knowledge.
    Given the diversity of potential authors and projects that can be brought into
    this process, we do not expect that these tips will address every possible project.
    Rather, these tips are based on our own experiences and will be useful when different
    groups and communities can uptake different elements into their own workflows.
    We believe that creating inclusive, interdisciplinary, and dynamic environments
    is ultimately good for science, providing a way to exchange knowledge and ideas
    as a community. We hope that these rules will prove useful for others who might
    wish to explore this space.</p>"
  DOI: 10.31222/osf.io/et8ak
  type: manuscript
  source: Crossref
  title: Introducing Massively Open Online Papers (MOOPs)
  author:
  - given: Jonathan
    family: Tennant
  - given: Natalia Z
    family: Bielczyk
  - given: Bastian
    family: Greshake Tzovaras
  - given: Paola
    family: Masuzzo
  - given: Tobias
    family: Steiner
  issued:
    date-parts:
    - - 2019
      - 7
      - 2
  URL: https://doi.org/gf7k53
  id: 16H8Gdlkx
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.31222/osf.io/et8ak
- publisher: PeerJ
  abstract: "<jats:p>For many decades, the hyperinflation of subscription prices for
    scholarly journals have concerned scholarly institutions. After years of fruitless
    efforts to solve this “serials crisis”, open access has been proposed as the latest
    potential solution. However, also the prices for open access publishing are high
    and are rising well beyond inflation. What has been missing from the public discussion
    so far is a quantitative approach to determine the actual costs of efficiently
    publishing a scholarly article using state-of-the-art technologies, such that
    informed decisions can be made as to appropriate price levels. Here we provide
    a granular, step-by-step calculation of the costs associated with publishing primary
    research articles, from submission, through peer-review, to publication, indexing
    and archiving. We find that these costs range from less than US$200 per article
    in modern, large scale publishing platforms using post-publication peer-review,
    to about US$1,000 per article in prestigious journals with rejection rates exceeding
    90%. The publication costs for a representative scholarly article today come to
    lie at around US$400. We discuss the additional non-publication items that make
    up the difference between publication costs and final price.</jats:p>"
  DOI: 10.7287/peerj.preprints.27809v1
  type: manuscript
  source: Crossref
  title: Assessing the size of the affordability problem in scholarly publishing
  author:
  - given: Alexander
    family: Grossmann
  - given: Björn
    family: Brembs
  issued:
    date-parts:
    - - 2019
      - 6
      - 18
  URL: https://doi.org/gf5ggz
  id: dyi21la4
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: doi:10.7287/peerj.preprints.27809v1
# paywallwatch.com has been sniped as per https://github.com/ajrbyers/paywallwatch/issues/2
- id: wTYUqRuy
  type: webpage
  title: Paywall Watch
  URL: http://www.paywallwatch.com
  accessed:
    date-parts:
    - - 2019
      - 11
      - 2
  note: |-
    This CSL JSON Item was automatically generated by Manubot v0.2.4 using citation-by-identifier.
    standard_id: url:http://www.paywallwatch.com
- id: 5ocYoh1T
  type: article-journal
  container-title: Satoshi Village
  language: en
  source: blog.dhimmel.com
  title: The history of publishing delays
  URL: https://blog.dhimmel.com/history-of-delays/
  author:
  - family: Himmelstein
    given: Daniel
  accessed:
    date-parts:
    - - '2023'
      - 5
      - 16
  issued:
    date-parts:
    - - '2016'
      - 2
      - 10
  note: |-
    This CSL Item was generated by Manubot v0.5.5 from its persistent identifier (standard_id).
    standard_id: url:https://blog.dhimmel.com/history-of-delays
- id: 18R6gqjc1
  type: post-weblog
  title: Cost models for running an online open journal
  author:
  - given: Daniel S.
    family: Katz
  - given: Lorena A.
    family: Barba
  - given: Kyle E.
    family: Niemeyer
  - given: Arfon M.
    family: Smith
  container-title: Journal of Open Source Software Blog
  issued:
    date-parts:
    - - 2019
      - 6
      - 4
  accessed:
    date-parts:
    - - 2019
      - 10
      - 22
  URL: https://blog.joss.theoj.org/2019/06/cost-models-for-running-an-online-open-journal
  note: |-
    Loaded from an external bibliography file by Manubot.
    source_bibliography: manual-references.json
    standard_id: url:https://blog.joss.theoj.org/2019/06/cost-models-for-running-an-online-open-journal