diff --git a/modules/gatk.nf b/modules/gatk.nf index d486a86..0cfcb07 100644 --- a/modules/gatk.nf +++ b/modules/gatk.nf @@ -154,7 +154,7 @@ process gatk_haplotype_caller { script: def args = task.ext.args ?: '' - def outfile = "${bam.baseName}.g.vcf.gz" + def outfile = "${bam.baseName}.g.vcf.gz*" """