NAMESPACE

# Generated by roxygen2: do not edit by hand

export(addStatusByCutoff)
export(addStatusByRank)
export(autoEdgerComparison)
export(autoLimmaComparison)
export(autoPairwiseMatrixTest)
export(contrastsFromDesign)
export(countsToTmm)
export(createPairwiseContrasts)
export(designFromSampInfo)
export(edgerDfFromContrasts)
export(fisherExactTest)
export(gseaFromStats)
export(gseaPlot)
export(heatmapPlot)
export(limmaDfFromContrasts)
export(oraFromStats)
export(overRepresentationAnalysis)
export(pairwiseMatrixTest)
export(pcaPlot)
export(translateMatrix)
export(translateMatrixWithDb)
export(violinPlot)
export(volcanoPlot)
import(dplyr)
import(ggfortify)
import(ggplot2)
import(pheatmap)
import(tidyr)
importFrom(AnnotationDbi,select)
importFrom(dplyr,"%>%")
importFrom(dplyr,bind_rows)
importFrom(dplyr,group_by)
importFrom(dplyr,select)
importFrom(dplyr,summarise_all)
importFrom(dplyr,sym)
importFrom(edgeR,DGEList)
importFrom(edgeR,calcNormFactors)
importFrom(edgeR,cpm)
importFrom(edgeR,estimateDisp)
importFrom(edgeR,glmQLFTest)
importFrom(edgeR,glmQLFit)
importFrom(edgeR,topTags)
importFrom(fgsea,fgseaSimple)
importFrom(ggplot2,autoplot)
importFrom(ggplot2,theme_bw)
importFrom(limma,contrasts.fit)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,makeContrasts)
importFrom(limma,topTable)
importFrom(stats,fisher.test)
importFrom(stats,formula)
importFrom(stats,model.matrix)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,t.test)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
importFrom(utils,combn)