diff --git a/LICENSE.txt b/LICENSE.txt index fa0deea..65a7abe 100644 --- a/LICENSE.txt +++ b/LICENSE.txt @@ -1,4 +1,4 @@ -Copyright (c) 2019 - 2022, Tobias Pietzsch, Jean-Yves Tinevez +Copyright (c) 2019 - 2023, Tobias Pietzsch, Jean-Yves Tinevez All rights reserved. Redistribution and use in source and binary forms, with or without modification, diff --git a/pom.xml b/pom.xml index 89277f3..8c81903 100644 --- a/pom.xml +++ b/pom.xml @@ -10,7 +10,7 @@ org.mastodon mastodon-pasteur - 1.0.0-beta-7-SNAPSHOT + 1.0.0-beta-8-SNAPSHOT Mastodon Pasteur Plugins Mastodon plugins developed in the context of Pasteur users projects. @@ -75,7 +75,7 @@ ImageJ Forum - http://forum.imagej.net/ + https://forum.image.sc/ @@ -101,8 +101,8 @@ Mastodon authors Tobias Pietzsch, Jean-Yves Tinevez - 1.0.0-beta-27-SNAPSHOT - 1.0.0-beta-14-SNAPSHOT + 1.0.0-beta-27 + 1.0.0-beta-14 sign,deploy-to-scijava diff --git a/src/main/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparator.java b/src/main/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparator.java index 9d08598..f8dd474 100644 --- a/src/main/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparator.java +++ b/src/main/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparator.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/io/csv/CSVImporter.java b/src/main/java/org/mastodon/mamut/io/csv/CSVImporter.java index 2c97fe0..35df785 100644 --- a/src/main/java/org/mastodon/mamut/io/csv/CSVImporter.java +++ b/src/main/java/org/mastodon/mamut/io/csv/CSVImporter.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/io/csv/plugin/CSVImporterPlugin.java b/src/main/java/org/mastodon/mamut/io/csv/plugin/CSVImporterPlugin.java index 933b016..acf80b2 100644 --- a/src/main/java/org/mastodon/mamut/io/csv/plugin/CSVImporterPlugin.java +++ b/src/main/java/org/mastodon/mamut/io/csv/plugin/CSVImporterPlugin.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterPanel.java b/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterPanel.java index eb05b12..03c5079 100644 --- a/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterPanel.java +++ b/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterPanel.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterUIController.java b/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterUIController.java index f214403..a172d02 100644 --- a/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterUIController.java +++ b/src/main/java/org/mastodon/mamut/io/csv/plugin/ui/CSVImporterUIController.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/nearest/Builder.java b/src/main/java/org/mastodon/mamut/nearest/Builder.java index bb15a34..196c0bf 100644 --- a/src/main/java/org/mastodon/mamut/nearest/Builder.java +++ b/src/main/java/org/mastodon/mamut/nearest/Builder.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import org.mastodon.mamut.feature.SpotIntensityFeature; diff --git a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatComputation.java b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatComputation.java index 0767052..bb36f16 100644 --- a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatComputation.java +++ b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatComputation.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import java.util.ArrayList; diff --git a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatFeature.java b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatFeature.java index 6823ddb..456472d 100644 --- a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatFeature.java +++ b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatFeature.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import java.util.HashMap; diff --git a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatModel.java b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatModel.java index a966aaf..bcd405a 100644 --- a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatModel.java +++ b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatModel.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import java.util.ArrayList; diff --git a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatPlugin.java b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatPlugin.java index a7c3df4..9d0a49f 100644 --- a/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatPlugin.java +++ b/src/main/java/org/mastodon/mamut/nearest/NearestObjectStatPlugin.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import java.awt.event.ActionEvent; @@ -30,7 +58,7 @@ public class NearestObjectStatPlugin implements MamutPlugin { - public static final String[] MENU_PATH = new String[] { "Plugins" }; + public static final String[] MENU_PATH = new String[] { "Plugins", "Compute Feature" }; public static final String SHOW_NEAREST_NEIGHBORS_STATS_DIALOG_ACTION = "generate statistics on nearest neighbors"; @@ -40,7 +68,7 @@ public class NearestObjectStatPlugin implements MamutPlugin static { - menuTexts.put( SHOW_NEAREST_NEIGHBORS_STATS_DIALOG_ACTION, "Generate statistics on nearest neighbors" ); + menuTexts.put( SHOW_NEAREST_NEIGHBORS_STATS_DIALOG_ACTION, "Statistics on nearest neighbors" ); } private final ShowDialogAction toggleDialog = new ShowDialogAction(); diff --git a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatController.java b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatController.java index 20a9e6f..5275b7d 100644 --- a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatController.java +++ b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatController.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest.ui; import java.util.Timer; diff --git a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatListPanel.java b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatListPanel.java index 9111d60..82bcdb4 100644 --- a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatListPanel.java +++ b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatListPanel.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest.ui; import java.awt.BorderLayout; diff --git a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatMainPanel.java b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatMainPanel.java index b5c7abb..3d9d8fa 100644 --- a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatMainPanel.java +++ b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatMainPanel.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest.ui; import java.awt.BorderLayout; diff --git a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelIO.java b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelIO.java index 0c672e7..c63036f 100644 --- a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelIO.java +++ b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelIO.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest.ui; import static org.yaml.snakeyaml.DumperOptions.FlowStyle.FLOW; diff --git a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelManager.java b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelManager.java index 371d7c6..9e9ff53 100644 --- a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelManager.java +++ b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatModelManager.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest.ui; import java.util.ArrayList; diff --git a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatPanel.java b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatPanel.java index db132aa..4366425 100644 --- a/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatPanel.java +++ b/src/main/java/org/mastodon/mamut/nearest/ui/NearestObjectStatPanel.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest.ui; import java.awt.Component; diff --git a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePanel.java b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePanel.java index 943ba13..6a567c2 100644 --- a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePanel.java +++ b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePanel.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePlugin.java b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePlugin.java index aba04b5..76a61ee 100644 --- a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePlugin.java +++ b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImagePlugin.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUIController.java b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUIController.java index 3b367c2..44ff715 100644 --- a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUIController.java +++ b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUIController.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUtils.java b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUtils.java index 6c9f119..b27f9e4 100644 --- a/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUtils.java +++ b/src/main/java/org/mastodon/mamut/spottrackimage/SpotTrackImageUtils.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/test/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparatorTest.java b/src/test/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparatorTest.java index 4094447..c879a41 100644 --- a/src/test/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparatorTest.java +++ b/src/test/java/org/mastodon/mamut/io/csv/AutoDetectCSVSeparatorTest.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTest.java b/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTest.java index 3aef269..1458802 100644 --- a/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTest.java +++ b/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTest.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTestDrive.java b/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTestDrive.java index 1dd25fd..0f0a6ad 100644 --- a/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTestDrive.java +++ b/src/test/java/org/mastodon/mamut/io/csv/CSVImporterTestDrive.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/test/java/org/mastodon/mamut/io/csv/CSVImporterUITestDrive.java b/src/test/java/org/mastodon/mamut/io/csv/CSVImporterUITestDrive.java index 71db8ff..e73d48c 100644 --- a/src/test/java/org/mastodon/mamut/io/csv/CSVImporterUITestDrive.java +++ b/src/test/java/org/mastodon/mamut/io/csv/CSVImporterUITestDrive.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/test/java/org/mastodon/mamut/io/csv/TestDrivePasteurPlugins.java b/src/test/java/org/mastodon/mamut/io/csv/TestDrivePasteurPlugins.java index 6a0ef26..84acf83 100644 --- a/src/test/java/org/mastodon/mamut/io/csv/TestDrivePasteurPlugins.java +++ b/src/test/java/org/mastodon/mamut/io/csv/TestDrivePasteurPlugins.java @@ -2,7 +2,7 @@ * #%L * mastodon-pasteur * %% - * Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: diff --git a/src/test/java/org/mastodon/mamut/nearest/NearestNeighborsStatsTest.java b/src/test/java/org/mastodon/mamut/nearest/NearestNeighborsStatsTest.java index cd86561..af31a1a 100644 --- a/src/test/java/org/mastodon/mamut/nearest/NearestNeighborsStatsTest.java +++ b/src/test/java/org/mastodon/mamut/nearest/NearestNeighborsStatsTest.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import static org.junit.Assert.assertEquals; diff --git a/src/test/java/org/mastodon/mamut/nearest/TestNearestNeighborStats.java b/src/test/java/org/mastodon/mamut/nearest/TestNearestNeighborStats.java index 8eb88fe..e974b6d 100644 --- a/src/test/java/org/mastodon/mamut/nearest/TestNearestNeighborStats.java +++ b/src/test/java/org/mastodon/mamut/nearest/TestNearestNeighborStats.java @@ -1,3 +1,31 @@ +/*- + * #%L + * mastodon-pasteur + * %% + * Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez + * %% + * Redistribution and use in source and binary forms, with or without + * modification, are permitted provided that the following conditions are met: + * + * 1. Redistributions of source code must retain the above copyright notice, + * this list of conditions and the following disclaimer. + * 2. Redistributions in binary form must reproduce the above copyright notice, + * this list of conditions and the following disclaimer in the documentation + * and/or other materials provided with the distribution. + * + * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" + * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE + * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR + * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF + * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS + * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN + * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) + * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE + * POSSIBILITY OF SUCH DAMAGE. + * #L% + */ package org.mastodon.mamut.nearest; import java.awt.event.WindowAdapter; diff --git a/src/test/resources/org/mastodon/mamut/io/csv/TestMedianCSVImport.xml b/src/test/resources/org/mastodon/mamut/io/csv/TestMedianCSVImport.xml index 0bb0a51..26ba857 100644 --- a/src/test/resources/org/mastodon/mamut/io/csv/TestMedianCSVImport.xml +++ b/src/test/resources/org/mastodon/mamut/io/csv/TestMedianCSVImport.xml @@ -3,7 +3,7 @@ #%L mastodon-pasteur %% - Copyright (C) 2019 - 2022 Tobias Pietzsch, Jean-Yves Tinevez + Copyright (C) 2019 - 2023 Tobias Pietzsch, Jean-Yves Tinevez %% Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: