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Pack procedural growth ingredients #142

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4 tasks
meganrm opened this issue Feb 22, 2023 · 0 comments
Open
4 tasks

Pack procedural growth ingredients #142

meganrm opened this issue Feb 22, 2023 · 0 comments

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@meganrm
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meganrm commented Feb 22, 2023

Use Case

We want to include procedural growth ingredients using the new recipe schema. These ingredients start as a seed and grow based on pre-determined rules in a collision-avoiding manner. Possible options for growing subunits are cylinders (ref. issue #14) or spheres. It would also be great to include branching of ingredients based on biological parameters (e.g. actin).

Possible issues/subtasks

  • Update the grow.py ingredient class to include parameters from the new recipe schema
  • Create test recipe for grow ingredients
  • Successfully pack grow ingredients with cylinder or sphere subunits
  • Create interface with simularium viewer to visualize these ingredients
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