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pyMotifFinder

This is a module with utilities to find network motifs.

It is written for educative purposes using either trivial or already available algorithms. It has an emphasis on using an approach easy to understand, which means that it does not use more complex state-of-the-art algorithms. In other words, do not expect it to have a great performance or to be usable in too large networks.

Dependencies

  • Python 2.7
  • networkx

How do I get set up?

Download the package and set your PYTHONPATH to include its location