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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(Bartlett_test)
export(Bootstrap_phy_tree_with_cophenetic)
export(MG)
export(MG_shape)
export(Pre_processing_hashcodes)
export(Pre_processing_species)
export(RandomForest_selected_ASVs)
export(Shapiro_Wilk_test)
export(adjust_abundance_one_third)
export(adjusted_prevalence)
export(alluvial_plot)
export(calculate_list_average_scaling_factors)
export(calculate_spikeIn_factors)
export(calculate_spike_percentage)
export(calculate_spike_percentage_list)
export(calculate_summary_stats_table)
export(color_palette)
export(conclusion)
export(convert_categorical_to_factors)
export(convert_to_absolute_counts)
export(create_directory)
export(detect_common_asvs_taxa)
export(glom_taxa_at_rank)
export(install_and_load)
export(my_custom_theme)
export(norm.DESeq)
export(norm.Poisson)
export(norm.QN)
export(norm.RUVg)
export(norm.RUVs)
export(norm.SVA)
export(norm.TC)
export(norm.TMM)
export(norm.UQ)
export(norm.clr)
export(norm.css)
export(norm.med)
export(norm.rar)
export(norm.rle)
export(norm.tss)
export(normalization_set)
export(perform_ANCOMBC)
export(perform_DESeq2)
export(perform_and_visualize_differential_abundance)
export(perform_differential_abundance)
export(perform_edgeR)
export(plot_core_microbiome_custom)
export(plot_glommed_tree)
export(plot_tree_custom)
export(plot_tree_nj)
export(plot_tree_with_alignment)
export(plotbar_abundance)
export(proportion_adj)
export(random_subsample_WithReductionFactor)
export(relativized_filtered_taxa)
export(remove_zero_negative_count_samples)
export(ridge_plot_it)
export(set_nf)
export(summ_count_phyloseq)
export(summ_phyloseq_ASV_OTUID)
export(summ_phyloseq_sampleID)
export(taxa_barplot)
export(tidy_phyloseq)
export(transform_plot)
export(visualize_differential_abundance)