Cannot Quit Neovim when Pyright Enabled (hangs)

[fishbotics]

Hi all,

I'm not sure where the right place to seek help for this is, so I thought I'd try here. My Neovim Pyright-LSP suddenly stopped working today. I'm not sure what changed but now if Pyright is enabled and I try to quit, the quit will just hang forever. I'm not even sure how to debug this because the whole program freezes and I have to kill the terminal. Anyone have suggestions on what to do? Here are the relevant parts of my init.vim

local lsp_servers = {
	pyright = {},  -- Note that if I comment this out, quitting works again
	ruff_lsp = {},
	eslint = {},
	jsonls = {},
	tailwindcss = {},
	tsserver = {},
	terraformls = {},
	tflint = {},
	lua_ls = {},
	yamlls = {},
}
require("mason").setup()
require("mason-lspconfig").setup({
	ensure_installed = lsp_servers,
	automatic_installation = true,
})
local null_servers = {
	"prettierd",
	"stylua",
	"jq",
	"isort",
	"black",
	"mypy",
	"prettierd",
}
require("mason-null-ls").setup({
	ensure_installed = null_servers,
	automatic_installation = true,
	automatic_setup = true,
	handlers = {},
})
--
local augroup = vim.api.nvim_create_augroup("LspFormatting", {})
require("null-ls").setup({
	on_attach = function(client, bufnr) -- Autoformats on save
		if client.supports_method("textDocument/formatting") then
			vim.api.nvim_clear_autocmds({ group = augroup, buffer = bufnr })
			vim.api.nvim_create_autocmd("BufWritePre", {
				group = augroup,
				buffer = bufnr,
				callback = function()
					vim.lsp.buf.format()
				end,
			})
		end
	end,
})
--
vim.g.coq_settings = {
	auto_start = "shut-up",
	keymap = {
		jump_to_mark = "", -- Prevent clash with split jumping
		eval_snips = "<leader>j",
	},
}
local coq = require("coq")
--
-- The null-ls stuff is activated automatically up above
-- by `setup_handlers()`, but the LSP servers need to be
-- manually set up here. Each one is setup() and COQ is
-- activated for them at the same time.
for lsp, settings in pairs(lsp_servers) do
	require("lspconfig")[lsp].setup(coq.lsp_ensure_capabilities({
		on_attach = function(_, buffer)
			server_maps({ buffer = buffer })
		end,
		settings = settings,
	}))
end

Thanks!

[oscarbenjamin]

I have the same problem also on Ubuntu 22.04 and with neovim 0.10.0-dev (from PPA). The problem seemed to start yesterday or the day before perhaps but I don't remember updating or changing anything. I am not sure exactly what changed to cause this problem since according to Mason pyright had not been updated. I have now used updated to the latest version of pyright (1.1.309) but the problem is still there.

The problem only happens if I am in a project directory that has a pyproject.toml or setup.py file (even if empty) e.g.:

$ mkdir demo
$ cd demo
$ nvim t.py  # works fine and I can quit with :q
$ nvim t.py  # still works fine
$ touch pyproject.toml  # empty pyproject.toml
$ nvim t.py  # now :q hangs and I have to run killall nvim

I enabled debugging with :lua vim.lsp.set_log_level('debug') and then after opening an empty file, trying to quit and then killing nvim the log shows:

$ cat ~/.local/state/nvim/lsp.log
...
[START][2023-05-18 13:48:58] LSP logging initiated
[INFO][2023-05-18 13:48:58] .../vim/lsp/rpc.lua:662	"Starting RPC client"	{  args = { "--stdio" },  cmd = "pyright-langserver",  extra = {    cwd = "/home/oscar/demo"  }}
[DEBUG][2023-05-18 13:48:58] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 1,  jsonrpc = "2.0",  method = "initialize",  params = {    capabilities = {      textDocument = {        callHierarchy = {          dynamicRegistration = false        },        codeAction = {          codeActionLiteralSupport = {            codeActionKind = {              valueSet = { "", "quickfix", "refactor", "refactor.extract", "refactor.inline", "refactor.rewrite", "source", "source.organizeImports" }            }          },          dataSupport = true,          dynamicRegistration = false,          isPreferredSupport = true,          resolveSupport = {            properties = { "edit" }          }        },        completion = {          completionItem = {            commitCharactersSupport = true,            deprecatedSupport = true,            documentationFormat = { "markdown", "plaintext" },            insertReplaceSupport = true,            insertTextModeSupport = {              valueSet = { 1, 2 }            },            labelDetailsSupport = true,            preselectSupport = true,            resolveSupport = {              properties = { "documentation", "detail", "additionalTextEdits" }            },            snippetSupport = true,            tagSupport = {              valueSet = { 1 }            }          },          completionItemKind = {            valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 }          },          completionList = {            itemDefaults = { "commitCharacters", "editRange", "insertTextFormat", "insertTextMode", "data" }          },          contextSupport = true,          dynamicRegistration = false,          insertTextMode = 1        },        declaration = {          linkSupport = true        },        definition = {          linkSupport = true        },        documentHighlight = {          dynamicRegistration = false        },        documentSymbol = {          dynamicRegistration = false,          hierarchicalDocumentSymbolSupport = true,          symbolKind = {            valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 }          }        },        hover = {          contentFormat = { "markdown", "plaintext" },          dynamicRegistration = false        },        implementation = {          linkSupport = true        },        publishDiagnostics = {          relatedInformation = true,          tagSupport = {            valueSet = { 1, 2 }          }        },        references = {          dynamicRegistration = false        },        rename = {          dynamicRegistration = false,          prepareSupport = true        },        semanticTokens = {          augmentsSyntaxTokens = true,          dynamicRegistration = false,          formats = { "relative" },          multilineTokenSupport = false,          overlappingTokenSupport = true,          requests = {            full = {              delta = true            },            range = false          },          serverCancelSupport = false,          tokenModifiers = { "declaration", "definition", "readonly", "static", "deprecated", "abstract", "async", "modification", "documentation", "defaultLibrary" },          tokenTypes = { "namespace", "type", "class", "enum", "interface", "struct", "typeParameter", "parameter", "variable", "property", "enumMember", "event", "function", "method", "macro", "keyword", "modifier", "comment", "string", "number", "regexp", "operator", "decorator" }        },        signatureHelp = {          dynamicRegistration = false,          signatureInformation = {            activeParameterSupport = true,            documentationFormat = { "markdown", "plaintext" },            parameterInformation = {              labelOffsetSupport = true            }          }        },        synchronization = {          didSave = true,          dynamicRegistration = false,          willSave = true,          willSaveWaitUntil = true        },        typeDefinition = {          linkSupport = true        }      },      window = {        showDocument = {          support = true        },        showMessage = {          messageActionItem = {            additionalPropertiesSupport = false          }        },        workDoneProgress = true      },      workspace = {        applyEdit = true,        configuration = true,        didChangeWatchedFiles = {          dynamicRegistration = true,          relativePatternSupport = true        },        semanticTokens = {          refreshSupport = true        },        symbol = {          dynamicRegistration = false,          hierarchicalWorkspaceSymbolSupport = true,          symbolKind = {            valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 }          }        },        workspaceEdit = {          resourceOperations = { "rename", "create", "delete" }        },        workspaceFolders = true      }    },    clientInfo = {      name = "Neovim",      version = "0.10.0"    },    initializationOptions = vim.empty_dict(),    processId = 42948,    rootPath = "/home/oscar/demo",    rootUri = "file:///home/oscar/demo",    trace = "off",    workspaceFolders = { {        name = "/home/oscar/demo",        uri = "file:///home/oscar/demo"      } }  }}
[INFO][2023-05-18 13:48:58] .../vim/lsp/rpc.lua:662	"Starting RPC client"	{  args = { "/home/oscar/.local/share/nvim/site/pack/packer/start/copilot.vim/copilot/dist/agent.js" },  cmd = "node",  extra = {    cwd = "/home/oscar"  }}
[DEBUG][2023-05-18 13:48:58] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 1,  jsonrpc = "2.0",  method = "initialize",  params = {    capabilities = {      textDocument = {        callHierarchy = {          dynamicRegistration = false        },        codeAction = {          codeActionLiteralSupport = {            codeActionKind = {              valueSet = { "", "quickfix", "refactor", "refactor.extract", "refactor.inline", "refactor.rewrite", "source", "source.organizeImports" }            }          },          dataSupport = true,          dynamicRegistration = false,          isPreferredSupport = true,          resolveSupport = {            properties = { "edit" }          }        },        completion = {          completionItem = {            commitCharactersSupport = false,            deprecatedSupport = false,            documentationFormat = { "markdown", "plaintext" },            preselectSupport = false,            snippetSupport = false          },          completionItemKind = {            valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 }          },          contextSupport = false,          dynamicRegistration = false        },        declaration = {          linkSupport = true        },        definition = {          linkSupport = true        },        documentHighlight = {          dynamicRegistration = false        },        documentSymbol = {          dynamicRegistration = false,          hierarchicalDocumentSymbolSupport = true,          symbolKind = {            valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 }          }        },        hover = {          contentFormat = { "markdown", "plaintext" },          dynamicRegistration = false        },        implementation = {          linkSupport = true        },        publishDiagnostics = {          relatedInformation = true,          tagSupport = {            valueSet = { 1, 2 }          }        },        references = {          dynamicRegistration = false        },        rename = {          dynamicRegistration = false,          prepareSupport = true        },        semanticTokens = {          augmentsSyntaxTokens = true,          dynamicRegistration = false,          formats = { "relative" },          multilineTokenSupport = false,          overlappingTokenSupport = true,          requests = {            full = {              delta = true            },            range = false          },          serverCancelSupport = false,          tokenModifiers = { "declaration", "definition", "readonly", "static", "deprecated", "abstract", "async", "modification", "documentation", "defaultLibrary" },          tokenTypes = { "namespace", "type", "class", "enum", "interface", "struct", "typeParameter", "parameter", "variable", "property", "enumMember", "event", "function", "method", "macro", "keyword", "modifier", "comment", "string", "number", "regexp", "operator", "decorator" }        },        signatureHelp = {          dynamicRegistration = false,          signatureInformation = {            activeParameterSupport = true,            documentationFormat = { "markdown", "plaintext" },            parameterInformation = {              labelOffsetSupport = true            }          }        },        synchronization = {          didSave = true,          dynamicRegistration = false,          willSave = true,          willSaveWaitUntil = true        },        typeDefinition = {          linkSupport = true        }      },      window = {        showDocument = {          support = true        },        showMessage = {          messageActionItem = {            additionalPropertiesSupport = false          }        },        workDoneProgress = true      },      workspace = {        applyEdit = true,        configuration = true,        didChangeWatchedFiles = {          dynamicRegistration = true,          relativePatternSupport = true        },        semanticTokens = {          refreshSupport = true        },        symbol = {          dynamicRegistration = false,          hierarchicalWorkspaceSymbolSupport = true,          symbolKind = {            valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 }          }        },        workspaceEdit = {          resourceOperations = { "rename", "create", "delete" }        },        workspaceFolders = true      }    },    clientInfo = {      name = "Neovim",      version = "0.10.0"    },    processId = 42948,    rootPath = vim.NIL,    rootUri = vim.NIL,    trace = "off",    workspaceFolders = vim.NIL  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = "Pyright language server 1.1.309 starting",    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	"Pyright language server 1.1.309 starting"
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = "Server root directory: /home/oscar/.local/share/nvim/mason/packages/pyright/node_modules/pyright/dist/",    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	"Server root directory: /home/oscar/.local/share/nvim/mason/packages/pyright/node_modules/pyright/dist/"
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = 'Starting service instance "/home/oscar/demo"',    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	'Starting service instance "/home/oscar/demo"'
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 1,  jsonrpc = "2.0",  result = {    capabilities = {      callHierarchyProvider = true,      codeActionProvider = {        codeActionKinds = { "quickfix", "source.organizeImports" },        workDoneProgress = true      },      completionProvider = {        completionItem = {          labelDetailsSupport = true        },        resolveProvider = true,        triggerCharacters = { ".", "[", '"', "'" },        workDoneProgress = true      },      declarationProvider = {        workDoneProgress = true      },      definitionProvider = {        workDoneProgress = true      },      documentHighlightProvider = {        workDoneProgress = true      },      documentSymbolProvider = {        workDoneProgress = true      },      executeCommandProvider = {        commands = {},        workDoneProgress = true      },      hoverProvider = {        workDoneProgress = true      },      referencesProvider = {        workDoneProgress = true      },      renameProvider = {        prepareProvider = true,        workDoneProgress = true      },      signatureHelpProvider = {        triggerCharacters = { "(", ",", ")" },        workDoneProgress = true      },      textDocumentSync = 2,      typeDefinitionProvider = {        workDoneProgress = true      },      workspace = {        workspaceFolders = {          changeNotifications = true,          supported = true        }      },      workspaceSymbolProvider = {        workDoneProgress = true      }    }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "initialized",  params = vim.empty_dict()}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "workspace/didChangeConfiguration",  params = {    settings = {      python = {        analysis = {          autoSearchPaths = true,          diagnosticMode = "workspace",          useLibraryCodeForTypes = true        }      }    }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "workspace/didChangeConfiguration",  params = {    settings = {      python = {        analysis = {          autoSearchPaths = true,          diagnosticMode = "workspace",          useLibraryCodeForTypes = true        }      }    }  }}
[INFO][2023-05-18 13:48:59] .../lua/vim/lsp.lua:1345	"LSP[pyright]"	"server_capabilities"	{  server_capabilities = {    callHierarchyProvider = true,    codeActionProvider = {      codeActionKinds = { "quickfix", "source.organizeImports" },      workDoneProgress = true    },    completionProvider = {      completionItem = {        labelDetailsSupport = true      },      resolveProvider = true,      triggerCharacters = { ".", "[", '"', "'" },      workDoneProgress = true    },    declarationProvider = {      workDoneProgress = true    },    definitionProvider = {      workDoneProgress = true    },    documentHighlightProvider = {      workDoneProgress = true    },    documentSymbolProvider = {      workDoneProgress = true    },    executeCommandProvider = {      commands = {},      workDoneProgress = true    },    hoverProvider = {      workDoneProgress = true    },    referencesProvider = {      workDoneProgress = true    },    renameProvider = {      prepareProvider = true,      workDoneProgress = true    },    signatureHelpProvider = {      triggerCharacters = { "(", ",", ")" },      workDoneProgress = true    },    textDocumentSync = {      change = 2,      openClose = true,      save = {        includeText = false      },      willSave = false,      willSaveWaitUntil = false    },    typeDefinitionProvider = {      workDoneProgress = true    },    workspace = {      workspaceFolders = {        changeNotifications = true,        supported = true      }    },    workspaceSymbolProvider = {      workDoneProgress = true    }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "textDocument/didOpen",  params = {    textDocument = {      languageId = "python",      text = "\n",      uri = "file:///home/oscar/demo/t.py",      version = 0    }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 0,  jsonrpc = "2.0",  method = "client/registerCapability",  params = {    registrations = { {        id = "0b7e7874-852b-4749-81f2-a236c246e968",        method = "workspace/didChangeWatchedFiles",        registerOptions = {          watchers = { {              globPattern = "**/pyrightconfig.json",              kind = 7            }, {              globPattern = "**",              kind = 7            } }        }      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = vim.NIL,  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 0,  jsonrpc = "2.0",  result = vim.NIL}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 1,  jsonrpc = "2.0",  method = "workspace/configuration",  params = {    items = { {        scopeUri = "file:///home/oscar/demo",        section = "python"      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 2,  jsonrpc = "2.0",  method = "workspace/configuration",  params = {    items = { {        scopeUri = "file:///home/oscar/demo",        section = "python"      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = { {      analysis = {        autoSearchPaths = true,        diagnosticMode = "workspace",        useLibraryCodeForTypes = true      }    } },  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 1,  jsonrpc = "2.0",  result = { {      analysis = {        autoSearchPaths = true,        diagnosticMode = "workspace",        useLibraryCodeForTypes = true      }    } }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = { {      analysis = {        autoSearchPaths = true,        diagnosticMode = "workspace",        useLibraryCodeForTypes = true      }    } },  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 2,  jsonrpc = "2.0",  result = { {      analysis = {        autoSearchPaths = true,        diagnosticMode = "workspace",        useLibraryCodeForTypes = true      }    } }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 3,  jsonrpc = "2.0",  method = "workspace/configuration",  params = {    items = { {        scopeUri = "file:///home/oscar/demo",        section = "python.analysis"      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = { {      autoSearchPaths = true,      diagnosticMode = "workspace",      useLibraryCodeForTypes = true    } },  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 3,  jsonrpc = "2.0",  result = { {      autoSearchPaths = true,      diagnosticMode = "workspace",      useLibraryCodeForTypes = true    } }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 4,  jsonrpc = "2.0",  method = "workspace/configuration",  params = {    items = { {        scopeUri = "file:///home/oscar/demo",        section = "python.analysis"      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = { {      autoSearchPaths = true,      diagnosticMode = "workspace",      useLibraryCodeForTypes = true    } },  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 4,  jsonrpc = "2.0",  result = { {      autoSearchPaths = true,      diagnosticMode = "workspace",      useLibraryCodeForTypes = true    } }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 5,  jsonrpc = "2.0",  method = "workspace/configuration",  params = {    items = { {        scopeUri = "file:///home/oscar/demo",        section = "pyright"      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = { vim.NIL },  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 5,  jsonrpc = "2.0",  result = { vim.NIL }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 6,  jsonrpc = "2.0",  method = "workspace/configuration",  params = {    items = { {        scopeUri = "file:///home/oscar/demo",        section = "pyright"      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = { vim.NIL },  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 6,  jsonrpc = "2.0",  result = { vim.NIL }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = "Loading pyproject.toml file at /home/oscar/demo/pyproject.toml",    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	"Loading pyproject.toml file at /home/oscar/demo/pyproject.toml"
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = 'Pyproject file "/home/oscar/demo/pyproject.toml" has no "[tool.pyright]" section.',    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	'Pyproject file "/home/oscar/demo/pyproject.toml" has no "[tool.pyright]" section.'
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = "No source files found.",    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	"No source files found."
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 7,  jsonrpc = "2.0",  method = "client/registerCapability",  params = {    registrations = { {        id = "127adc0c-e1f7-4bbc-bb70-44c01562a6d8",        method = "workspace/didChangeWatchedFiles",        registerOptions = {          watchers = { {              globPattern = "**/pyrightconfig.json",              kind = 7            }, {              globPattern = "**",              kind = 7            }, {              globPattern = {                baseUri = "file:///home/oscar/.pyenv/versions/3.8.16/lib/python3.8",                pattern = "**"              },              kind = 7            } }        }      } }  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = vim.NIL,  status = true}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 7,  jsonrpc = "2.0",  result = vim.NIL}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = "Loading pyproject.toml file at /home/oscar/demo/pyproject.toml",    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	"Loading pyproject.toml file at /home/oscar/demo/pyproject.toml"
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = 'Pyproject file "/home/oscar/demo/pyproject.toml" has no "[tool.pyright]" section.',    type = 3  }}
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "window/logMessage",  params = {    message = "No source files found.",    type = 3  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	'Pyproject file "/home/oscar/demo/pyproject.toml" has no "[tool.pyright]" section.'
[DEBUG][2023-05-18 13:48:59] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 8,  jsonrpc = "2.0",  method = "client/registerCapability",  params = {    registrations = { {        id = "3db7d4d5-228b-4fba-906c-91a41e695f5b",        method = "workspace/didChangeWatchedFiles",        registerOptions = {          watchers = { {              globPattern = "**/pyrightconfig.json",              kind = 7            }, {              globPattern = "**",              kind = 7            }, {              globPattern = {                baseUri = "file:///home/oscar/.pyenv/versions/3.8.16/lib/python3.8",                pattern = "**"              },              kind = 7            } }        }      } }  }}
[INFO][2023-05-18 13:48:59] ...lsp/handlers.lua:539	"No source files found."
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = vim.NIL,  status = true}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 8,  jsonrpc = "2.0",  result = vim.NIL}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 9,  jsonrpc = "2.0",  method = "client/unregisterCapability",  params = {    unregisterations = { {        id = "0b7e7874-852b-4749-81f2-a236c246e968",        method = "workspace/didChangeWatchedFiles"      } }  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "textDocument/publishDiagnostics",  params = {    diagnostics = {},    uri = "file:///home/oscar/demo/t.py",    version = 0  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "LogMessage",  params = {    extra = { "Agent service starting" },    level = 0,    message = "[DEBUG] [agent] [2023-05-18T12:49:00.080Z] Agent service starting",    metadataStr = "[DEBUG] [agent] [2023-05-18T12:49:00.080Z]"  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 0,  jsonrpc = "2.0",  method = "client/registerCapability",  params = {    registrations = { {        id = "9c4caf20-e42b-4c82-aa46-9825a987e127",        method = "workspace/didChangeWorkspaceFolders",        registerOptions = vim.empty_dict()      } }  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 1,  jsonrpc = "2.0",  result = {    capabilities = {      textDocumentSync = {        change = 2,        openClose = true      },      workspace = {        workspaceFolders = {          changeNotifications = true,          supported = true        }      }    }  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = vim.NIL,  status = true}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 9,  jsonrpc = "2.0",  result = vim.NIL}
[WARN][2023-05-18 13:49:00] ...lsp/handlers.lua:137	"The language server copilot triggers a registerCapability handler despite dynamicRegistration set to false. Report upstream, this warning is harmless"
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = vim.NIL,  status = true}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 0,  jsonrpc = "2.0",  result = vim.NIL}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 10,  jsonrpc = "2.0",  method = "client/unregisterCapability",  params = {    unregisterations = { {        id = "127adc0c-e1f7-4bbc-bb70-44c01562a6d8",        method = "workspace/didChangeWatchedFiles"      } }  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "initialized",  params = vim.empty_dict()}
[INFO][2023-05-18 13:49:00] .../lua/vim/lsp.lua:1345	"LSP[copilot]"	"server_capabilities"	{  server_capabilities = {    textDocumentSync = {      change = 2,      openClose = true    },    workspace = {      workspaceFolders = {        changeNotifications = true,        supported = true      }    }  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:403	"server_request: callback result"	{  result = vim.NIL,  status = true}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 10,  jsonrpc = "2.0",  result = vim.NIL}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "textDocument/didOpen",  params = {    textDocument = {      languageId = "python",      text = "\n",      uri = "file:///home/oscar/demo/t.py",      version = 0    }  }}
[DEBUG][2023-05-18 13:49:00] .../lua/vim/lsp.lua:1392	"LSP[copilot]"	"client.request"	2	"setEditorInfo"	{  editorConfiguration = {    disabledLanguages = { {        languageId = "."      }, {        languageId = "cvs"      }, {        languageId = "gitcommit"      }, {        languageId = "gitrebase"      }, {        languageId = "help"      }, {        languageId = "hgcommit"      }, {        languageId = "markdown"      }, {        languageId = "svn"      }, {        languageId = "yaml"      } },    enableAutoCompletions = true  },  editorInfo = {    name = "Neovim",    version = "0.10.0-dev + Node.js 18.16.0"  },  editorPluginInfo = {    name = "copilot.vim",    version = "1.8.3"  }}	<function 1>	1
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 2,  jsonrpc = "2.0",  method = "setEditorInfo",  params = {    editorConfiguration = {      disabledLanguages = { {          languageId = "."        }, {          languageId = "cvs"        }, {          languageId = "gitcommit"        }, {          languageId = "gitrebase"        }, {          languageId = "help"        }, {          languageId = "hgcommit"        }, {          languageId = "markdown"        }, {          languageId = "svn"        }, {          languageId = "yaml"        } },      enableAutoCompletions = true    },    editorInfo = {      name = "Neovim",      version = "0.10.0-dev + Node.js 18.16.0"    },    editorPluginInfo = {      name = "copilot.vim",      version = "1.8.3"    }  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  jsonrpc = "2.0",  method = "LogMessage",  params = {    extra = { "Telemetry initialized" },    level = 0,    message = "[DEBUG] [agent] [2023-05-18T12:49:00.464Z] Telemetry initialized",    metadataStr = "[DEBUG] [agent] [2023-05-18T12:49:00.464Z]"  }}
[DEBUG][2023-05-18 13:49:00] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 2,  jsonrpc = "2.0",  result = "OK"}
[INFO][2023-05-18 13:49:01] .../lua/vim/lsp.lua:1876	"exit_handler"	{ {    _on_attach = <function 1>,    attached_buffers = { true },    cancel_request = <function 2>,    commands = {},    config = {      autostart = true,      capabilities = {        textDocument = {          callHierarchy = {            dynamicRegistration = false          },          codeAction = {            codeActionLiteralSupport = {              codeActionKind = {                valueSet = { "", "quickfix", "refactor", "refactor.extract", "refactor.inline", "refactor.rewrite", "source", "source.organizeImports" }              }            },            dataSupport = true,            dynamicRegistration = false,            isPreferredSupport = true,            resolveSupport = {              properties = { "edit" }            }          },          completion = {            completionItem = {              commitCharactersSupport = true,              deprecatedSupport = true,              documentationFormat = { "markdown", "plaintext" },              insertReplaceSupport = true,              insertTextModeSupport = {                valueSet = { 1, 2 }              },              labelDetailsSupport = true,              preselectSupport = true,              resolveSupport = {                properties = { "documentation", "detail", "additionalTextEdits" }              },              snippetSupport = true,              tagSupport = {                valueSet = { 1 }              }            },            completionItemKind = {              valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 }            },            completionList = {              itemDefaults = { "commitCharacters", "editRange", "insertTextFormat", "insertTextMode", "data" }            },            contextSupport = true,            dynamicRegistration = false,            insertTextMode = 1          },          declaration = {            linkSupport = true          },          definition = {            linkSupport = true          },          documentHighlight = {            dynamicRegistration = false          },          documentSymbol = {            dynamicRegistration = false,            hierarchicalDocumentSymbolSupport = true,            symbolKind = {              valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 }            }          },          hover = {            contentFormat = { "markdown", "plaintext" },            dynamicRegistration = false          },          implementation = {            linkSupport = true          },          publishDiagnostics = {            relatedInformation = true,            tagSupport = {              valueSet = { 1, 2 }            }          },          references = {            dynamicRegistration = false          },          rename = {            dynamicRegistration = false,            prepareSupport = true          },          semanticTokens = {            augmentsSyntaxTokens = true,            dynamicRegistration = false,            formats = { "relative" },            multilineTokenSupport = false,            overlappingTokenSupport = true,            requests = {              full = {                delta = true              },              range = false            },            serverCancelSupport = false,            tokenModifiers = { "declaration", "definition", "readonly", "static", "deprecated", "abstract", "async", "modification", "documentation", "defaultLibrary" },            tokenTypes = { "namespace", "type", "class", "enum", "interface", "struct", "typeParameter", "parameter", "variable", "property", "enumMember", "event", "function", "method", "macro", "keyword", "modifier", "comment", "string", "number", "regexp", "operator", "decorator" }          },          signatureHelp = {            dynamicRegistration = false,            signatureInformation = {              activeParameterSupport = true,              documentationFormat = { "markdown", "plaintext" },              parameterInformation = {                labelOffsetSupport = true              }            }          },          synchronization = {            didSave = true,            dynamicRegistration = false,            willSave = true,            willSaveWaitUntil = true          },          typeDefinition = {            linkSupport = true          }        },        window = {          showDocument = {            support = true          },          showMessage = {            messageActionItem = {              additionalPropertiesSupport = false            }          },          workDoneProgress = true        },        workspace = {          applyEdit = true,          configuration = true,          didChangeWatchedFiles = {            dynamicRegistration = true,            relativePatternSupport = true          },          semanticTokens = {            refreshSupport = true          },          symbol = {            dynamicRegistration = false,            hierarchicalWorkspaceSymbolSupport = true,            symbolKind = {              valueSet = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26 }            }          },          workspaceEdit = {            resourceOperations = { "rename", "create", "delete" }          },          workspaceFolders = true        }      },      cmd = { "pyright-langserver", "--stdio" },      cmd_cwd = "/home/oscar/demo",      filetypes = { "python" },      flags = {},      get_language_id = <function 3>,      handlers = <1>{},      init_options = vim.empty_dict(),      log_level = 2,      message_level = 2,      name = "pyright",      on_attach = <function 4>,      on_exit = <function 5>,      on_init = <function 6>,      root_dir = "/home/oscar/demo",      settings = {        python = {          analysis = {            autoSearchPaths = true,            diagnosticMode = "workspace",            useLibraryCodeForTypes = true          }        }      },      single_file_support = true,      workspace_folders = <2>{ {          name = "/home/oscar/demo",          uri = "file:///home/oscar/demo"        } },      <metatable> = <3>{        __tostring = <function 7>      }    },    handlers = <table 1>,    id = 1,    initialized = true,    is_stopped = <function 8>,    messages = {      messages = {},      name = "pyright",      progress = {},      status = {}    },    name = "pyright",    notify = <function 9>,    offset_encoding = "utf-16",    request = <function 10>,    request_sync = <function 11>,    requests = {},    rpc = {      is_closing = <function 12>,      notify = <function 13>,      request = <function 14>,      terminate = <function 15>    },    server_capabilities = {      callHierarchyProvider = true,      codeActionProvider = {        codeActionKinds = { "quickfix", "source.organizeImports" },        workDoneProgress = true      },      completionProvider = {        completionItem = {          labelDetailsSupport = true        },        resolveProvider = true,        triggerCharacters = { ".", "[", '"', "'" },        workDoneProgress = true      },      declarationProvider = {        workDoneProgress = true      },      definitionProvider = {        workDoneProgress = true      },      documentHighlightProvider = {        workDoneProgress = true      },      documentSymbolProvider = {        workDoneProgress = true      },      executeCommandProvider = {        commands = {},        workDoneProgress = true      },      hoverProvider = {        workDoneProgress = true      },      referencesProvider = {        workDoneProgress = true      },      renameProvider = {        prepareProvider = true,        workDoneProgress = true      },      signatureHelpProvider = {        triggerCharacters = { "(", ",", ")" },        workDoneProgress = true      },      textDocumentSync = {        change = 2,        openClose = true,        save = {          includeText = false        },        willSave = false,        willSaveWaitUntil = false      },      typeDefinitionProvider = {        workDoneProgress = true      },      workspace = {        workspaceFolders = {          changeNotifications = true,          supported = true        }      },      workspaceSymbolProvider = {        workDoneProgress = true      }    },    stop = <function 16>,    supports_method = <function 17>,    workspace_did_change_configuration = <function 18>,    workspace_folders = <table 2>  }, {    _on_attach = <function 19>,    attached_buffers = { true },    cancel_request = <function 20>,    commands = {},    config = {      cmd = { "node", "/home/oscar/.local/share/nvim/site/pack/packer/start/copilot.vim/copilot/dist/agent.js" },      cmd_cwd = "/home/oscar",      flags = {},      get_language_id = <function 21>,      handlers = <4>{        LogMessage = <function 22>,        PanelSolution = <function 23>,        PanelSolutionsDone = <function 24>,        statusNotification = <function 25>      },      name = "copilot",      on_exit = <function 26>,      on_init = <function 27>,      settings = {}    },    handlers = <table 4>,    id = 2,    initialized = true,    is_stopped = <function 28>,    messages = {      messages = {},      name = "copilot",      progress = {},      status = {}    },    name = "copilot",    notify = <function 29>,    offset_encoding = "utf-16",    request = <function 30>,    request_sync = <function 31>,    requests = {},    rpc = {      is_closing = <function 32>,      notify = <function 33>,      request = <function 34>,      terminate = <function 35>    },    server_capabilities = {      textDocumentSync = {        change = 2,        openClose = true      },      workspace = {        workspaceFolders = {          changeNotifications = true,          supported = true        }      }    },    stop = <function 36>,    supports_method = <function 37>  } }
[DEBUG][2023-05-18 13:49:01] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 2,  jsonrpc = "2.0",  method = "shutdown"}
[DEBUG][2023-05-18 13:49:01] .../vim/lsp/rpc.lua:284	"rpc.send"	{  id = 3,  jsonrpc = "2.0",  method = "shutdown"}
[DEBUG][2023-05-18 13:49:01] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 3,  jsonrpc = "2.0"}
[DEBUG][2023-05-18 13:49:01] .../vim/lsp/rpc.lua:387	"rpc.receive"	{  id = 2,  jsonrpc = "2.0"}
[DEBUG][2023-05-18 13:49:01] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "exit"}
[DEBUG][2023-05-18 13:49:01] .../vim/lsp/rpc.lua:284	"rpc.send"	{  jsonrpc = "2.0",  method = "exit"}

[fishbotics]

What I have learned is that this was broken in main: neovim/neovim#22833 (comment)

It was fixed in neovim/neovim@33687f5

I removed the PPA version and switched to using the AppImage, which I'll manage manually. My new workflow (at least until it changes again) is to download the AppImage, put it in ~/Applications and then make a simlink to /usr/bin/nvim