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ci-nc.yml
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name: MODFLOW 6 continuous integration
on:
push:
branches:
- idm-netcdf-conus-ci
paths-ignore:
- '**.md'
- '**.pdf'
- '**.tex'
- '**.jpg'
- '**.jpeg'
- '**.png'
- '**.bbl'
- '**.bib'
- 'doc/**.dat'
- 'doc/**.ipynb'
- 'doc/**.py'
- 'doc/**.sh'
- 'doc/**.xlsx'
- '.hpc/**'
pull_request:
branches:
- master
- develop
paths-ignore:
- '**.md'
- '**.pdf'
- '**.tex'
- '**.jpg'
- '**.jpeg'
- '**.png'
- '**.bbl'
- '**.bib'
- 'doc/**.dat'
- 'doc/**.ipynb'
- 'doc/**.py'
- 'doc/**.sh'
- 'doc/**.xlsx'
- '.hpc/**'
jobs:
test_gfortran:
name: Test gnu fortran
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-22.04, macos-12 ]
defaults:
run:
shell: bash -l {0}
env:
FC: gfortran
GCC: 13
steps:
- name: Checkout modflow6
uses: actions/checkout@v4
with:
path: modflow6
- name: Checkout modflow6-testmodels
uses: actions/checkout@v4
with:
repository: MODFLOW-USGS/modflow6-testmodels
path: modflow6-testmodels
- name: Checkout modflow6-examples
uses: actions/checkout@v4
with:
repository: MODFLOW-USGS/modflow6-examples
path: modflow6-examples
- name: Setup GNU Fortran ${{ env.GCC }}
uses: fortran-lang/setup-fortran@v1
with:
compiler: gcc
version: ${{ env.GCC }}
- name: Setup Micromamba
uses: mamba-org/setup-micromamba@v1
with:
environment-file: modflow6/environment.yml
create-args: >-
pkg-config
netcdf-fortran
init-shell: >-
bash
powershell
cache-environment: true
cache-downloads: true
- name: Build modflow6
working-directory: modflow6
run: |
nc-config --all
nf-config
meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
meson install -C builddir
- name: Show build log
if: failure()
working-directory: modflow6
run: cat builddir/meson-logs/meson-log.txt
- name: Unit test programs
working-directory: modflow6
run: meson test --verbose --no-rebuild -C builddir
- name: Update flopy
working-directory: modflow6/autotest
run: python update_flopy.py
- name: Get executables
working-directory: modflow6/autotest
env:
GITHUB_TOKEN: ${{ github.token }}
run: |
pytest -v --durations 0 get_exes.py
- name: Test modflow6
working-directory: modflow6/autotest
env:
REPOS_PATH: ${{ github.workspace }}
run: |
pytest -v --durations 0 test_gwf_chd01.py --netcdf
test_intel_fortran:
name: Test intel fortran
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
include:
- {os: ubuntu-22.04, compiler: intel-classic, version: 2021.7}
- {os: macos-12, compiler: intel-classic, version: 2021.7}
defaults:
run:
shell: bash -l {0}
steps:
- name: Checkout modflow6
uses: actions/checkout@v4
with:
path: modflow6
- name: Checkout modflow6-testmodels
uses: actions/checkout@v4
with:
repository: MODFLOW-USGS/modflow6-testmodels
path: modflow6-testmodels
- name: Setup Micromamba
uses: mamba-org/setup-micromamba@v1
with:
environment-file: modflow6/environment.yml
create-args: >-
pkg-config
netcdf-fortran
init-shell: >-
bash
powershell
cache-environment: true
cache-downloads: true
- name: Setup Intel Fortran
uses: fortran-lang/setup-fortran@v1
with:
compiler: ${{ matrix.compiler }}
version: ${{ matrix.version }}
- name: Update version files
working-directory: modflow6/distribution
run: python update_version.py
- name: Build modflow6
working-directory: modflow6
run: |
nc-config --all
nf-config
meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
meson install -C builddir
- name: Show build log
if: failure()
working-directory: modflow6
run: cat builddir/meson-logs/meson-log.txt
- name: Unit test programs
working-directory: modflow6
run: meson test --verbose --no-rebuild -C builddir
- name: Update flopy
working-directory: modflow6/autotest
run: python update_flopy.py
- name: Get executables
working-directory: modflow6/autotest
env:
GITHUB_TOKEN: ${{ github.token }}
run: pytest -v --durations 0 get_exes.py
- name: Test programs
working-directory: modflow6/autotest
env:
REPOS_PATH: ${{ github.workspace }}
run: |
pytest -v --durations 0 test_gwf_chd01.py --netcdf