diff --git a/README.md b/README.md index ae85aac..c752d6e 100644 --- a/README.md +++ b/README.md @@ -90,11 +90,11 @@ By following these steps, you can seamlessly transform your dataset, define nece # $N_PATIENTS_PER_SHARD is the number of patients per shard you want to use. # MEDS_transform-reshard_to_split \ - input_dir="$MIMICIV_MEDS_DIR" \ - cohort_dir="$MEDS_TAB_COHORT_DIR" \ - 'stages=["reshard_to_split"]' \ - stage="reshard_to_split" \ - stage_configs.reshard_to_split.n_patients_per_shard=$N_PATIENTS_PER_SHARD + input_dir="$MIMICIV_MEDS_DIR" \ + cohort_dir="$MEDS_TAB_COHORT_DIR" \ + 'stages=["reshard_to_split"]' \ + stage="reshard_to_split" \ + stage_configs.reshard_to_split.n_patients_per_shard=$N_PATIENTS_PER_SHARD ``` 1. **`meds-tab-describe`**: This command processes MEDS data shards to compute the frequencies of different code types. It differentiates codes into the following categories: