diff --git a/CreateIlluminaSampleSheet_V2.pl b/CreateIlluminaSampleSheet_V2.pl index 5b74613..dd7709b 100755 --- a/CreateIlluminaSampleSheet_V2.pl +++ b/CreateIlluminaSampleSheet_V2.pl @@ -283,9 +283,10 @@ sub _ProcessExperiment { # Check if barcodeType is one for which we know how to handle it. # unless (exists($gaf_barcode_types{$barcodeType})) { - $logger->fatal('Detected unknown barcodeType ' . $barcodeType . ' for internalSampleID ' . $internalSampleID . '.'); - $logger->fatal('Known barcodeType values are ' . join(' || ', keys(%gaf_barcode_types)) . '.'); - exit(1); + $gaf_barcode_types{$barcodeType}{'IlluminaDemultiplexing'}=1; + #$logger->fatal('Detected unknown barcodeType ' . $barcodeType . ' for internalSampleID ' . $internalSampleID . '.'); + #$logger->fatal('Known barcodeType values are ' . join(' || ', keys(%gaf_barcode_types)) . '.'); + #exit(1); } my @lanes = split(',',$lanes); # Separate multiple lane values like "1,2".