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pointed dcmstack to directory of 1 DTI scan and got confused on 4th dimention. cmd:
dcmstack -v DTI_2p5DB_SOME_NOISE
Processing source directory DTI_2p5DB_SOME_NOISE
Found 1088 source files in the directory
Found 1 groups of DICOM images
Writing out stack to path DTI_2p5DB_SOME_NOISE/301-DTI_2.5DB_SOME_NOISE_SENSE.nii.gz
Traceback (most recent call last):
File "/home/toddr/Software/anaconda2/bin/dcmstack", line 9, in
load_entry_point('dcmstack', 'console_scripts', 'dcmstack')()
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack_cli.py", line 324, in main
nii = stack.to_nifti(args.voxel_order, gen_meta)
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack.py", line 857, in to_nifti
data = self.get_data()
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack.py", line 763, in get_data
stack_shape = self.get_shape()
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack.py", line 726, in get_shape
raise InvalidStackError("Unable to guess key for sorting the "
dcmstack.dcmstack.InvalidStackError: The DICOM stack is not valid: Unable to guess key for sorting the fourth dimension
The text was updated successfully, but these errors were encountered:
pointed dcmstack to directory of 1 DTI scan and got confused on 4th dimention. cmd:
dcmstack -v DTI_2p5DB_SOME_NOISE
Processing source directory DTI_2p5DB_SOME_NOISE
Found 1088 source files in the directory
Found 1 groups of DICOM images
Writing out stack to path DTI_2p5DB_SOME_NOISE/301-DTI_2.5DB_SOME_NOISE_SENSE.nii.gz
Traceback (most recent call last):
File "/home/toddr/Software/anaconda2/bin/dcmstack", line 9, in
load_entry_point('dcmstack', 'console_scripts', 'dcmstack')()
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack_cli.py", line 324, in main
nii = stack.to_nifti(args.voxel_order, gen_meta)
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack.py", line 857, in to_nifti
data = self.get_data()
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack.py", line 763, in get_data
stack_shape = self.get_shape()
File "/home/toddr/Software/dcmstack/src/dcmstack/dcmstack.py", line 726, in get_shape
raise InvalidStackError("Unable to guess key for sorting the "
dcmstack.dcmstack.InvalidStackError: The DICOM stack is not valid: Unable to guess key for sorting the fourth dimension
The text was updated successfully, but these errors were encountered: